KEGG   Etheostoma cragini (Arkansas darter): 117937413
Entry
117937413         CDS       T07493                                 
Symbol
tob1b
Name
(RefSeq) protein Tob1b
  KO
K14443  protein Tob/BTG
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117937413 (tob1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecra03019]
    117937413 (tob1b)
Messenger RNA biogenesis [BR:ecra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117937413 (tob1b)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     117937413 (tob1b)
SSDB
Motif
Pfam: BTG PAM2 SinI T2SSM
Other DBs
NCBI-GeneID: 117937413
NCBI-ProteinID: XP_034717274
LinkDB
Position
21:complement(19056490..19059872)
AA seq 332 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GSELDKEIKNSFNPEAQVFMPISDPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSSGRGNNTNSGSSSKVARSSPTSNLGLNVNTLLKQKAISTSMHSL
YGLGLGQQQQKASALSPNAKEFVFPNLQGQASPGAVFPGEGSLGLGPLQYNNAFDVIAAY
GSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcagcttgaaattcaagtagcactcaactttattatttcctatttatacaacaaactc
cctcgacgacgtgtgaatatcttcggcgaagagctcgagaggcaactgaagaaaaaatat
gaaggccactggtatccggataagccatacaaaggttcagggttcaggtgcatccatgta
ggagagaaggtggaccctgtggtggagcaggcagccaaagagagcgggctggacattgaa
gacgtccggaataatctccctcaggaccttagtgtgtggattgacccatttgaggtttcc
taccagattggggagaagggaccggtaaaggtgctatatgtggatgataacaatgagaac
gggtcagagctggacaaggagatcaagaacagctttaatcccgaggcccaggtcttcatg
ccaatcagcgaccctgtcggggcttcctcagagtccagctccccctcccctccattcggc
cagtctgctgccgtgagcccctccttcatgccacgctccacccagcccttaactttcacc
actgccacctttgctgccaccaaattcggctccactaagatgaagagcagcggccgtggc
aacaacactaacagcggcagtagcagcaaggtggcccgcagctcccctaccagtaacttg
ggtctgaatgtcaacaccctactgaagcagaaagccatctccacctccatgcactcactg
tacgggctgggcctgggtcagcagcagcagaaggcctctgccctctcccctaatgccaag
gagtttgtgtttccaaacctccagggccaggccagcccaggagccgtgttccctggggag
ggctccctgggtctcggccctctgcagtacaacaatgcctttgacgtgattgcggcctac
ggaagcctcaacgacaagtcccttatggatggcctcaacttcagtctgagcaacatgcag
tattctaaccagcaattccagccagtcatggctaactaa

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