Etheostoma cragini (Arkansas darter): 117937458
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Entry
117937458 CDS
T07493
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117937458 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117937458 (gspt1)
03012 Translation factors [BR:
ecra03012
]
117937458 (gspt1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117937458 (gspt1)
Translation factors [BR:
ecra03012
]
Eukaryotic type
Release factors
117937458 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117937458
NCBI-ProteinID:
XP_034717338
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All DBs
Position
21:complement(14511174..14521100)
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AA seq
597 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAELPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
ITASDGATDPIASMEVAETAGMHSHCTAGTACSAPVENGGTEADMTTEEETWEQKEEPGG
GGGGGDEDLSSGGACEEGAARNEDEEMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGH
VDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEV
GRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTRE
HAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCS
GLTGANLKEPVTECPWYTGLAFIPHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLE
SGCISKAQQLVMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILCS
PDNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKT
RPRFVKQDQVCIARLRAAGVICLETFKEFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaagatgccgaggccccg
gctgccgcggcagagctcccaactgccttcgccgcactcaacgtcaatgccaagccgttt
gtccccaacgttaacgccccggtgtttgtacctagctttcttcaagcaagtgccgtagaa
attacggcttcagacggtgccactgacccaattgccagcatggaggtggcagaaacagcc
ggtatgcattcacattgtactgcaggcactgcatgttcagctccagtggagaatggaggc
acagaggcagacatgaccacagaggaagagacgtgggagcagaaggaggagccgggggga
ggaggaggcggaggagacgaggacctgagttcaggaggagcctgtgaggagggcgcggcg
aggaacgaggacgaggagatgatggaggaggaagaggaggagatgcccatgcccaaagtg
gctccggcaccgccagatgcccctaagaaagaacatgtgaacgtggtctttattggtcac
gtggatgctggaaaatcaacaattggaggacagatcatgtacttaactggaatggtggaa
aagcgaaccctggaaaaatatgaaagagaagcaaaagaaaagaacagggagacatggtac
ctgtcgtgggctctggacacaaaccaggaggagagagacaaggggaagacggtcgaggtc
gggagagcttactttgagacggagaagaaacatttcaccatcctggatgcccccgggcac
aagagctttgtccctaacatgattggtggagcgtcacaagccgacctggctgtcctggtg
atttccgcaagaaagggggagtttgagaccggctttgagaagggaggacagacacgggaa
catgccatgctggctaaaacagcaggagtcaagcatctcattgtcctggtcaacaagatg
gatgaccccactgtcaactggagcctagaaaggtatgaagagtgtaaggagaagctggtt
ccatttctaaagaaggtgggctttaaccccaagaaggacatccactttatgccttgctct
ggactcacaggtgccaacctcaaggagcccgtaactgaatgcccctggtacacgggtttg
gcatttattccccatctggacagtttgccaaattttaccagatccaacgatggaccagtc
agactacctattgtagacaaatacaaggacatgggcaccgttatcctggggaagctggag
tctggatgcatcagtaaagcccagcagctggtcatgatgccaaaccggcacacagtggaa
gtattgagcctgctgagcgatgatgtggagacagacgatgctactcctggggagaatctg
aagttgaggctgaagggcattgaggaggaagaaatcctccctgggtttatcctctgtagt
cctgacaacctctgccactccggtcgcacctttgacgcacagatcgtcattattgagcac
aaatcaatcatttgtcctggttacaatgcagtccttcacatccacacctgcattgaagaa
gttcaaatctcagccttaatctgtttggtggacaaaaagacgggggagaaaagcaaaaca
cgaccacgctttgttaagcaggaccaggtgtgtatcgccaggctccgggcagctggagtc
atctgcttagagaccttcaaagaattccctcagatgggacgattcacactgagagacgag
ggcaaaactatcgccatcggcaaagtgctgaagctggtgccagaaaaggactaa
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