Etheostoma cragini (Arkansas darter): 117937514
Help
Entry
117937514 CDS
T07493
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117937514 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117937514 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117937514 (shha)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C46: hedgehog family
117937514 (shha)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Morphogens
117937514 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
PT-HINT
Intein_splicing
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
117937514
NCBI-ProteinID:
XP_034717415
LinkDB
All DBs
Position
22:complement(15283683..15292320)
Genome browser
AA seq
413 aa
AA seq
DB search
MLLWTRIVLVGFICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGSKKAVKHLQTGDRVLAADDDGNPIFTDFIM
FIDQDSTTRRLFYVIETDSGQKITLTAAHLLFVGHNTTGEERMSAIFASQVQSGQKVFVF
DGERSRLEPVTVKRIYTEEHYGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWALAPIR
LAHCVSSWLFRSQPQVSAQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtttcatctgcttgtccttggtgtcatct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctgggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacactgacatcattttcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagttgaactctctggccatctcagtgatgaatcagtggcctggggtg
aagctgcgggtcacagagggatgggacgaagacggacaccacttcgaggagtcgctccac
tacgagggcagggcggtggacatcaccacctcagacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgattgggtctattatgaatccaaagcccac
attcactgctctgttaaagcagaaaactcagtggcagcaaagtcgggcggctgcttccca
ggctcctccacggtcacccttcaggatggtagcaagaaggcggtcaaacaccttcaaacc
ggcgacagagtcctggcagcagatgacgatggaaacccgattttcaccgacttcatcatg
ttcatagaccaagactcgacgaccaggaggctcttctacgtgatcgaaaccgactcgggc
cagaaaatcaccctcaccgccgcgcacctcctcttcgtcggccacaacaccacgggagag
gagcggatgtcggcgatcttcgccagccaagtccaatctggacaaaaggtgtttgtgttt
gatggcgagcgaagtcgactcgagcctgtgaccgtaaaacggatttacacggaagagcac
tacggctcttttgcgccagtgaccgtgcaggggaccgtcgtggtggaccaggtccttgcg
tcctgttacgcagtgatcgaagaccacgatctggcgcactgggccctggcacccatcagg
ctcgcccactgcgtgtcctcgtggcttttccgttctcagcctcaagtcagtgcacagaac
gacggagtgcactggtactccaagatcctgtatcaattaggaacttggctcttggacagc
cactcgatccatccacttgggatgtcagtttatccaagttga
DBGET
integrated database retrieval system
