Etheostoma cragini (Arkansas darter): 117937671
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Entry
117937671 CDS
T07493
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
ecra04520
Adherens junction
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117937671
09144 Cellular community - eukaryotes
04520 Adherens junction
117937671
04530 Tight junction
117937671
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117937671
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117937671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117937671
NCBI-ProteinID:
XP_034717663
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Position
22:2635106..3004054
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AA seq
1391 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIQVHSLIEQAAMRYKKAIAKDPSYWVQVHRLEHGDGGILD
LDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTQSPEPFTSDMSSASAFQPYQPN
SEIEVTPSALRSNMPLHVRRTSDPSLAGLPTGEVPGGPEAPSRKNPTRWSTTVGFQKHKH
KPNTSAGTGSLERKGRGGQAYRSLPRDASGWTTQFQREMTRSSLSANHPMVDRWLDRQEQ
EEEDEERRRQERRIERIEPIGRADSSLEYSPALSLESLLKPVTVSNGGGPLGIHVVPLSS
QDVRTQGLLVKRLERGGKAEQERLFQENDCIVKINQGDIRNLRFEQAQHIFKKAMCGPVI
LFHVVPAAMKRQYELLSARSELSPPQSNRVQFGPDSQRSRDKSSLVVGLTPRAGPQPGLN
HDHQGPLAGSTPEPSRRYASLPPILVPRTSTSPSLQRRVSTNPSTNSYLKNKGRRFNIQL
KKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDQLLEVSGVDLNDKSQ
EEVVALLRATPMGETVNLSVIRPEDSQLPREVQPEEDDMVLTADGTQEFLTFEIPLNDSG
SAGLGVSVKGNRSKENHTDLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLHGMSNQD
AMETLRMSMSVEGNKRGMIQLIVARHVSKTNEVAPCSPPVLEHPVTSLQDNQERRISNSP
YETIEGLHSNSPRLANMIDRTGNYQLSPTVNMPQDDIVMIEDDRPPLLPVHLSDQSSSSS
HDDMGFVGEYPVPWIHELPGQNECSLSPDADPDGSFLREGFGRQSMSEKRTKQYENANDL
DIIKARKSKSMDLVADEINCSTTTNGGSSEVGPSLGLKKSSSLESLQTAVAEASMNSQIN
VNRPRSRIARGRGCNESFRAAIDKSYEKPGVPTAEEENIMETLDEDTEGSSRSGRESMST
SGDLILGPGLNGNLSKDDRQKDRDKVGEKEKKNPERDKEKEKDKDKNKSKKGVLKGLGEM
FRFGKHRRDERPGDRMERKGSSKCKAEDMQASEEETLRMRLEQERIQAKMRELREKQAKE
REYAEIQDIVGGTFSSDEEHTYAGIGSLDSSMDSSSMETHNHHYHLPQSPQSPRLPLSPQ
DNGPPLEALYAQVNKPRNGRPAAPDSSQLAPSNHDRIQRLRNEFQQVRHEDDVDDRRHTY
SFNQSWVSNGTETLSGRHSVTVETQVQKQQQEDRDGFQQAQRQYNSLPRQPRKTPSTVSQ
DSWDKVYMPADGFQTSKENPGHSSSQGSRNGYLGTSNFNARVLLETQELLRQEQRRREQE
ANKARPPAAQDPPSGSTYDHSREHLQAPGSSVVQAPPQSKGPYRQDVPPSPSQLAKLSRL
RGSEKGRLFYS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaactgtgtgtttcgggaggacccgggtggtcgttccgtgtggcgatgggaat
atacaagtccacagccttatcgaacaagctgccatgaggtataagaaggcgatcgctaag
gaccccagctactgggtccaggtccacaggttggaacatggagatggaggtattttggac
ctggatgacatgctgtgcgatgtggtggatgacaaagataggctggtagcagtatatgaa
gagcaggatcctcacaatggaggcgacggtaccagtgccagctccaccggtacgcagagt
cccgaacccttcaccagtgacatgagctcagcatcggcctttcagccctatcagcccaac
agtgagatcgaggtcaccccgtccgctctgcgatccaacatgcccctccatgtccgtcgc
accagtgatccctccctggccggccttcctacgggcgaagtcccgggtggtccagaagca
ccgtccagaaagaacccaacccgctggtccacaactgttggcttccaaaagcacaagcac
aaaccaaacacaagcgctggcaccggcagcctggaacgaaagggtaggggaggccaggcc
tatcggagtcttccacgtgatgcgagtggctggaccactcagttccagagggaaatgact
cgatcatccctgagcgccaaccatccaatggtggaccgatggcttgacaggcaggaacag
gaggaggaggacgaagaacgaaggagacaagaaaggaggattgaaaggattgagccaata
gggagggccgattcctcattggaatattctcctgcgttgagtctagaatccctgctcaaa
ccagtaacggtgtccaatggaggagggcccctcgggatccacgttgtgcctctcagttcg
caggatgtcaggactcagggcttgctggtgaagcgactggagcgtgggggcaaagctgag
caggagcgtctcttccaggagaacgactgtattgtcaaaattaatcagggagacattcgt
aacctgcgcttcgaacaagcccaacacattttcaagaaggcgatgtgtgggcccgtcatc
ctttttcacgtggtccccgctgccatgaagagacagtacgagctgctgtcggcccggagc
gagctcagcccgccccagtccaacagagtccaatttggcccagactctcagcgctcgcgg
gacaagtccagtttggtggtggggttgactcccagagctggaccacagccaggcctcaac
cacgaccaccaaggacccctggcaggaagcaccccagagccgagccgacgttatgcctcg
ttaccccccatcttggtccccaggacctccacctccccctccctgcagcgcagggtaagc
acaaatccctccaccaactcctacctgaagaacaaaggacgcagattcaacatccagctg
aagaaaggtccagagggtcttgggttcagcatcacatccagggacgtccccattggtggc
agtgctcccatttatgtcaaaaacatccttcctcgtggggccgccatccaagatggccga
ttgaaagctggagaccagctgctggaggttagtggagtggacctgaatgataagagccag
gaagaggtggtggccctgctacgagccacgcccatgggcgagactgtgaacctgtctgtg
attcgcccagaggactcccagctgcctcgtgaagtgcagccagaggaagatgacatggtg
ttaaccgctgacggaacacaagagttcctgacctttgagatccctctgaacgactcaggc
tcagcgggcctgggggttagtgtcaagggtaaccgctccaaggagaaccacactgacttg
ggcatctttgtcaaatccattattaatggaggtgctgctagcaaggatggccgtctacga
gtcaacgaccagctcattgcagtcaatggggagtcattgcatgggatgagcaaccaggac
gccatggaaacactgcgcatgtccatgtcggtagagggcaacaagcgagggatgattcag
ctcatcgtggctcggcacgtgtccaaaaccaatgaggtagccccctgcagtcctccagtt
ttagagcatccagtgacctctctacaggacaaccaggagcgccggatttccaactctcca
tacgaaacaattgaaggcttgcacagcaactccccacggctggctaatatgatcgatcgc
actggtaactaccagctctctcccactgtgaacatgccgcaggacgacatagtgatgatc
gaagatgataggccgcccctgctacctgtccacctttccgaccaatcatcctctagttcc
cacgatgacatgggctttgtgggagaatacccggtgccctggatccacgagctgcccggt
cagaatgaatgctcgctcagcccagacgcggaccctgacggttcgttcctgagggagggc
ttcggccgccagagtatgtccgaaaaacgcaccaaacagtatgaaaatgctaatgatctg
gacatcatcaaggcgcgaaagtccaagagcatggatctagtagcagatgagattaactgc
agcacaacaaccaatggaggttcgtcagaggttggaccctcgctgggactgaaaaagtcc
agctcccttgaaagcctccagacggctgttgccgaggcgtcgatgaacagtcagatcaat
gttaacaggccgcgctcgcggatcgctaggggccgcggctgcaacgagagcttccgagct
gcaattgacaaatcatacgagaaacctggggtcccaacagcagaagaagagaacatcatg
gagacattggacgaggacacggagggaagttccagatcaggtcgcgagtcgatgtccacc
agcggcgacctcattctgggacctgggctgaacggcaacctctccaaagatgacaggcag
aaagatcgggacaaggttggggagaaggaaaagaagaaccctgaaagggataaagagaag
gagaaagacaaagacaagaacaaatccaagaaaggcgtgctgaagggcctgggcgagatg
ttcaggtttggaaagcaccggagggatgagcggccaggagacaggatggagagaaagggc
tccagtaaatgcaaagctgaggacatgcaggcgtcagaggaggagaccttgcggatgagg
ctggaacaagagagaatacaggccaagatgcgggagcttcgggaaaagcaggctaaggag
agggaatatgctgagatccaagacattgtcggtggtaccttcagctcagatgaggagcac
acctacgccggcatcgggtcattagactcgtcgatggatagcagcagcatggagactcac
aaccaccactaccatctcccccagagtccccagagcccgcgccttcccttgagcccacag
gacaacggcccacccctggaggcgttgtatgcccaggtcaacaaacctcgcaatggacgc
cctgcagctccagacagcagtcagttggctcccagtaaccacgaccggatacaaaggcta
aggaatgagttccagcaggtcaggcatgaggatgacgtcgatgaccgtaggcacacctac
agcttcaaccagtcctgggtcagcaatgggacggagacgctgagcggacgccattcggta
acagtcgagactcaggtccagaaacagcagcaagaggaccgagatggtttccaacaagca
cagagacagtacaactccctgccacggcaacctcgtaagactcccagcacggtgtcccag
gactcatgggacaaggtgtacatgccagcagatggattccagacatcaaaggagaaccct
ggccactccagcagccagggatcacgtaacggctaccttggaacgtccaacttcaatgcc
cgtgtcctcttagagactcaggagttgctgaggcaggagcagaggcgcagagagcaggag
gccaacaaggccaggccacccgccgcacaggacccccccagcggcagcacctacgaccac
agcagagagcacctgcaggccccgggctcttctgtggttcaggccccacctcagtccaaa
ggcccctacagacaagatgtacccccgtcgccttctcagctcgcaaagctcagccggctt
cgaggctcagagaaagggaggctgttttactcctga
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integrated database retrieval system
