Etheostoma cragini (Arkansas darter): 117937946
Help
Entry
117937946 CDS
T07493
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11 isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117937946 (dcaf11)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117937946 (dcaf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Cytochrom_D1
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_RIG_1st
PROPPIN
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
117937946
NCBI-ProteinID:
XP_034718086
LinkDB
All DBs
Position
22:8531349..8546246
Genome browser
AA seq
614 aa
AA seq
DB search
MGSQSSSGMSGGRGSSSGNPADQPEGAESNQSNSSSSSSSSRGRRTADRQQGDRQTASEE
DVDLAEVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGNRYNPPVDAQ
PDTHEVDQSEIRTQIMLATGSSTLKGRHSFTHMLTEREQGRCRGSSFSHGECSRIRTHFL
PNYVSHKDTYQQKAFCGVYSEDGNMFLSACQDQNVRLYDTTRGRFHLRRTVKARDVGWSV
LDVCFTPDAQHVLYSSWSDYIHMCSIDGDSENHTALDLNPDERRFCVFSLAASTDGNEIL
GGANDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLR
EDRPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVT
QQNWDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLVRCRFSPEFSTGQRFIYSGCS
TGKIIIYDVLTGTVVSRLSGHDACVRDVSWHPYEDNIVSSSWDGAVRMWEHRQTHPLEEE
RERESESETALKQEGNTLRRTGRDFLLNSMLDINDYSYSVVVQCSFGRHSSLTLSSAVGR
PTSVFASLSADQSF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtctggtggaaggggctcttctagtggcaaccca
gcggatcagcctgaaggagcagaatcaaaccagagcaacagcagcagcagcagcagcagc
agccgaggccgcaggacggccgacaggcagcagggagacagacagacagcatcagaggag
gacgttgacttagctgaagtgctggcttacctactaaggaggggccaggtccgactggtc
catggcagtggagccacagggctgcagctggtccagtcctactctgactctgatgaggac
agcgacggcgcctgggagggtcggctggggaaccgctacaatccaccagtggacgcccaa
ccagacacacatgaagtggaccaaagtgagatccgaactcagatcatgctggccaccggc
tcctctaccctgaaaggccgacacagtttcacccacatgctaacagagagggaacaaggc
agatgtagaggctctagtttttcacatggagagtgcagtcgtatccgcacacattttctg
ccaaactatgtatcccacaaggatacgtaccaacagaaagccttctgtggagtgtacagc
gaggatggcaacatgttcctctccgcgtgccaagaccagaacgtccgcttgtacgacacc
accagggggcgctttcacctccggcgaacagtgaaggctcgggatgtgggctggagtgtt
ctggatgtctgcttcacccctgacgcacaacatgtgctctactccagctggtcagactac
attcatatgtgcagtatagatggagacagtgaaaaccacaccgcgctggacctcaatccc
gatgagaggaggttctgtgtgttctcactggctgcgtccacagatggcaacgagatcctg
ggaggagcaaatgatggctgcctttatgtttttgatctcgagcagaataaacgaacgctg
aagattgatgcccacgaggatgatgtgaacgcggtggcgtttgccgacagctcgtcccag
ctgctcttctccggcagcgacgacgcactgtgcaaggtgtgggacagaaggacgctgcgg
gaggacagaccgcagcctgttggacagctggccggccaccgagacggcatcaccttcatc
cacagcaagggtgacgcacgctatctgatcagcaactccaaggaccagtccatcaagctc
tgggacgtccggaagttctcgcccaaagagggtttggcagcttcccgcctcgctgtcacc
caacagaactgggactaccgctggcagcaggttccccagagagcactgaagagacacaag
ctgacaggcgacacctcggtgatgacgtaccgcggccacggcgttctgcacacccttgtc
cgctgccgtttctctccagagttcagcactgggcagaggttcatctactccggctgctcc
accggcaaaatcatcatttatgatgtcctgacgggcaccgtggtctccagactgtcgggc
catgacgcgtgtgtgagggacgtcagctggcacccgtacgaggacaacatcgtcagcagc
tcctgggacggagcggtgcgaatgtgggagcacagacagacccatccgctagaggaggag
agagagcgggagagcgagtcagagacggccctaaaacaggaaggcaatacgctcagaagg
actgggagagactttcttttaaattcaatgctggatattaatgattacagttatagcgtg
gttgtgcagtgttcatttggaaggcattctagccttacgttgtcaagtgcagtgggacgg
cctacttctgtttttgcctcactgtcagcagaccaaagcttttga
DBGET
integrated database retrieval system
