Etheostoma cragini (Arkansas darter): 117937960
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Entry
117937960 CDS
T07493
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117937960 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117937960 (smarcd3b)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117937960 (smarcd3b)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117937960 (smarcd3b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117937960 (smarcd3b)
PBAF complex
117937960 (smarcd3b)
GBAF(ncBAF) complex
117937960 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
117937960
NCBI-ProteinID:
XP_034718114
LinkDB
All DBs
Position
22:16710282..16747236
Genome browser
AA seq
523 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQAVQSRARKKPVGFPGANEMPARQMDMREPQS
DPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRP
MKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLV
IELDKDLYGPDNHLVESMRGSLLFQWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQP
PQFKLDPRLARLLGIHTQARSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRL
KFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLPSTA
NQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGN
PEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gcgcccatgggcccccctggcccaccgtacggtgggagcccggcggtgcgacccggcctg
ccctccccggtgatggagcccagtcgtaagaggcctgcaccctcccagcaggtccagcag
cagcagcagcagcaacagcagcagcaggcagtccagagccgggccagaaagaagccagtt
ggattccccggagccaatgagatgccggcgaggcagatggacatgagagagccccaatca
gatcccacgctcggatccaatgctaagagaaggaaaatggcagacaagattcttccgcaa
aggatccgtgagctggtccccgagtctcaggcctacatggatctgctggcatttgagcgc
aaactggaccagaccatcatgcgcaaacgtgtggacatccaggaggcgctgaagagacca
atgaagcagcagaagcgtaaactgaggctttacatatcgaacacgttcaaccctgccaga
cctgatgctgatgactcagatggcagcattgcatcatgggaattgcgagtagagggaaag
ttgctggacgaccctgggaagcagaagaagaagttttcttcgttttttaagagcctggtg
attgagctggacaaagacctctacggtcctgacaaccacctggttgagtcaatgcgtggt
tccctgctctttcagtggcaccgcacgcccaccactcaggagacggacggcttccaggtg
aaaaggccgggagacgtgagtgtgcgctgcactctgctgctgatgctggactaccagcct
ccccagtttaagctggaccctcgcctggctcgcctgcttggcattcacactcaggctcgc
tcctgcatcatccaggccctctggcaatacgtcaagaccaacaagctgcaggactcccat
gacaaggagtacatcaactgtgacaagtacttccaacagatctttgactgccctcggctg
aagttctctgagatccctcagcgcctcaccaacctccttttaccccccgaccccatcgtt
atcaaccatgtcatcagtgtggatcccaacgaccagaagaagacggcctgctacgacatc
gacgtggaggtggaagaccccctgaagggtcagatgagcagcttcctcccctccactgcc
aaccagcaggagatcgcctcactcgacaacaagatccatgagactatcgagtccatcaac
cagctgaagatccagagggacttcatgctcagtttctccagagatcccaagggctacatc
caggactggcttaaatcccagagccgagaccttaagttaatgacagacgtggtggggaac
cctgaagaggagaggagggcagcgttttaccacgagccttggtcccaggaggcggtcagc
cgctatttctactgcaagatccagcagaggagacaggagttggaacaggccttagctgtc
cgcaacacctaa
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integrated database retrieval system
