Etheostoma cragini (Arkansas darter): 117938020
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Entry
117938020 CDS
T07493
Name
(RefSeq) uncharacterized protein LOC117938020 isoform X1
KO
K18763
la-related protein 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117938020
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117938020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Se_S_carrier
Motif
Other DBs
NCBI-GeneID:
117938020
NCBI-ProteinID:
XP_034718230
LinkDB
All DBs
Position
22:complement(21341245..21354227)
Genome browser
AA seq
1570 aa
AA seq
DB search
MGCCFSKELNPGLQSERSSLLQPPLHDGLNDVTDQVRQHAVAVAQHVCLDEEEKRVADGL
AQRKLAEDEERPPELGNKVWTEVAVTSGDSTTRSERDHKAASTHEEKGAIIITTSTNIHT
NTETEEGMTHTGMPSCGPAPYMEVPTRSPAKQKIVENATLRALWFNKLPDGHTPKKCWSS
PARLPSANCQGNVTRSEVSDNLRPLPLDSECLETQWDCPEAEHNEEEGEEVCVVTTTLGQ
GFETRTRGFYSICSIDAGDLEYDLVHSQFQTAEATHLLHTAEAETAALPSVVESLASSQS
HTQASTVCDQEYVTESETTSQLHDEEPALSHQSSTILSQTHPESSLSAEETSLPHPVVKQ
ADPSSDPLALSSVQINSKDMQASTPNGTRFKDLDCQTSAKDTHESMDYMLMTSHANKSTC
VEEENKSETSSSSSSKLKPLQGDEVVFPLSGGQFEMDKSSQQTEAIPVSICRGHSEEGDV
GYTSTADKTPTELSSVSSILAVLSPPIELSAFSCHTDITPLSDFKTTFHHCDFILSDKLD
VNSNNATFKLSSSKPPSQDVVGPPELDLGDDCDKQRDSFDVKTQGAVTPEEPLQDAFMSG
DNRLAVKEPEVCQNSKPFERGDVTDLLPESAQITDHLDTRTAVNASITLHGLEDQSLGPL
TQPPTAESELSLTASFTPPPSSSSPCTPPVEGKHRCCPETEAKSAESECRQIQLEANPPE
KVFIHACEEGKNPTAAQGTQIDSPVKHESADTIEPPQTASQPPVVLSSSDSSDSMNPNDD
IGLPNYTAKCLPQAGHSSNENQLVEINGIQIHILQGEMSALDSDILPETISATGTPPQGV
EIGTGICDDSFVIPHNFSCLDDKASVLDCHEDMIPVDPAQVDVYASTPSYEIHFLGHEPP
ATAEEGEREGGMREMVSELLGEDADSSVCLLYPHPWIKLGLEDSCGGWAQGGFVAEPSQG
ESHPGADVEQIPALVSELQPSMALLGAYPYSTVMPQGRCVWDWHSDCTHSEPVAAPSLNP
NAEVWTNHNFNLDVPGPAYLPAHEPWLQFPSDPTNQEGYGSDFQQENMGPAEAVVEADPN
TPEYQAPSAEASIVNGEPVDPPITDETREELRTVLESCLTREHLGNDLYLNSQMDSDQYV
PIATLASLDKIKRISMDLDLISDILKSLPLVQVAPCGQKVRPSQSRCVVILREIPDTTPK
EEVEALFDGENIPEFLSCEFVSNDNWFITFKSETDAQQAYKYLREEVREFKGKPIMVRIK
AKTMAVTSFAPKNGYRPPQLDQCGNPYGSYFPPGNYQQPCPTQQLYDFTNDVWAAGGYQE
CADHQTMMNDFMSGFSNFKPHNAHRMRRGSRWSNSDRWQSNLNDSSQSSEQAPVEGSSSL
SRPGRGRSRGNLRRPSRGGRVESTSDRGRRGNFSQRRRENPRSWDKSAGNTHTAQSQTPP
RQPSPPPELGLTSFPPLPPAKIAMATVHAANGNVKIPVKTSSGESVPARSQEPQPIEEQN
VTERAETTGEAQPAQLTQEQVAESKRPSYAQICQRVSSNEPVPPADLAPTEAVQVPSFPG
PASKPDGLPQ
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggggtgctgctttagtaaagagctcaaccccggcttgcagagcgagaggagcagtctg
ttacagcccccgctccacgatgggctgaatgacgtgacagaccaggtcaggcaacacgct
gtggctgtagctcagcatgtgtgcttggacgaagaggaaaaacgtgtggcagacggactg
gcccagagaaaacttgcagaagatgaggaaagaccaccagaactgggcaacaaagtttgg
accgaggtggccgtgaccagcggggacagcaccacacggagtgagagagatcataaagca
gccagcactcacgaagagaagggggctataattatcacaaccagcacaaatatacataca
aacacggagactgaggaaggcatgacccatactggcatgcccagctgtggcccggccccg
tatatggaggtgcccacacggagtccagccaaacagaagattgtggagaatgccacactc
agggctttatggttcaataagctcccagacgggcacacgccgaaaaaatgttggtcatct
cccgccagattaccctctgctaactgccagggcaacgtcacaaggagcgaggtgtctgat
aacctgcggccactgcccctggacagcgagtgtctggagacacagtgggattgccccgaa
gctgagcacaacgaggaagaaggtgaggaagtctgtgtcgtcacaacaacgctgggtcaa
ggttttgaaacaaggacccgcggcttttacagcatatgttctatcgatgccggagacctt
gaatatgacctcgtccacagccaattccagacagctgaagcaacacacttgctgcacaca
gctgaagcagaaacagctgctctgcccagcgtagtggagtctctggcctccagccaatca
cacacacaggcatccacagtttgtgaccaggaatatgtcacagaatctgaaacaaccagc
cagttgcatgatgaggaaccagctttgagtcatcagtcttccaccatcctgtcacagaca
cacccagagagttcactctcagcagaggagacctccttacctcatcctgtagtaaagcag
gctgacccttcgtctgacccgctagccctgtccagcgttcaaataaacagcaaggatatg
caggcatcaacaccaaacgggactcggtttaaagatctggactgccagacctctgctaag
gacacacatgaatccatggattacatgttgatgacgtcacatgcaaataaaagcacatgt
gttgaggaggaaaataaaagtgagacttccagctccagttcttcaaagctgaaaccgctg
caaggggatgaggtcgtctttcccctgtctggaggacagtttgagatggataaatcctcg
caacagacggaagctattcctgttagtatctgcagaggccacagtgaggaaggtgatgtc
ggttacaccagcacagcagataagactcccactgagctgtcctcagtttcctccatctta
gctgtgttgtcacctcccattgaactgtcggccttctcctgccacacagacattactcct
ctctcggactttaaaaccacatttcaccactgtgacttcatattatctgacaaattagat
gtaaattcaaacaatgcaacatttaaattgagcagcagtaagcctcctagtcaagatgtt
gtaggaccacctgagttggaccttggagatgactgtgacaaacagcgtgacagttttgat
gtgaaaactcaaggtgccgtgacgccggaagagcctcttcaggatgcctttatgagtgga
gataacagactggcagtcaaagaaccagaagtctgtcagaacagcaaaccttttgaaaga
ggggatgttacagatttgttacctgaatcggctcaaatcaccgatcacctagatacaagg
acggctgtaaatgcaagcatcactcttcatggcctggaagatcaaagtctcggtcctctc
acacagcctcctactgctgaaagtgagctttctcttactgcttccttcactccacctccg
tcttcctcatctccgtgcacgcctcctgtggaaggcaagcatcgttgttgtccagaaact
gaagctaaatctgctgagagtgaatgcagacaaatccaactggaggccaatccaccagag
aaagtatttattcatgcatgtgaggaaggaaaaaacccaacagctgcacaggggactcag
attgattccccagtcaagcatgaatctgcagatacaatagaaccgcctcaaacagcatct
caacccccggtggtattaagctccagtgattcctctgactctatgaaccctaacgatgac
atcggcctgccaaattacactgctaaatgtttacctcaagctggacattcatcaaatgaa
aatcaattagtggagatcaatgggatacagattcacatcttacagggggagatgtctgcg
cttgacagtgatattcttccagaaactatttctgctacgggcacgccaccccaaggcgtc
gagatcggtaccggcatttgtgatgactcttttgtgattcctcataacttcagctgtctg
gatgacaaagcctcggttttggactgccatgaggacatgatccctgtggacccagcacag
gttgatgtttacgcctcaactccgtcatacgagattcacttcctaggacatgaacctcct
gctactgccgaggagggggagagggaaggagggatgagggagatggtgtctgagctgctg
ggtgaggatgcagactcctctgtctgcctcctctatccccacccctggatcaaactgggt
ctggaggatagctgtggggggtgggctcagggcgggtttgttgctgagcccagccaggga
gagagccacccgggtgctgacgtagagcagatcccggccctggtctcggagctccagcct
tctatggctctgctgggagcttacccctacagcacagtgatgcctcagggacgctgtgtg
tgggactggcactcagattgcactcactctgaacctgttgctgctccaagccttaaccct
aacgctgaggtatggactaatcacaacttcaacttggacgtccctggccccgcctacctg
ccggctcatgagccatggctgcaattccccagcgatccgaccaatcaggaaggatatggg
tcagacttccagcaggagaacatgggcccggctgaggctgttgttgaagcagatcccaac
acaccagagtaccaggcgccgtctgccgaagcttcaatagttaatggagagcccgttgac
ccacctatcacagatgagactagagaagagctgaggacagttttggagtcctgcctgacc
agggagcaccttggcaacgacctgtaccttaactctcagatggacagcgaccagtatgtt
cccatagcaactctggccagcctcgacaagatcaagaggatcagcatggacctggacctc
atctccgacattttgaaatcgctgccgctggtccaggtggctccttgtggacagaaggtc
cggcccagtcagagtcgatgtgtcgtcatcctgcgtgagatccccgacaccacacccaag
gaggaggtggaggctctctttgacggggaaaacattccagagttcctgagctgtgagttt
gtgagcaacgataactggttcatcactttcaaatcggaaaccgacgcacaacaggcctac
aagtacctccgagaagaggttcgagagtttaagggaaagccgatcatggtgaggataaaa
gccaaaaccatggcagtcacttcctttgctccaaaaaatggctaccgaccccctcagctg
gaccagtgcggcaatccttacggctcctatttcccccccggcaactaccagcagccctgc
cccacccagcagctgtatgatttcaccaatgacgtgtgggcagcggggggataccaagaa
tgtgctgatcatcaaaccatgatgaatgacttcatgagtggattctccaacttcaaacct
cataacgcacacaggatgaggagaggctcaaggtggtcgaattctgaccgttggcagtcc
aatctgaatgattcctcacagtcatcagagcaagcgccagtggagggctcctcttctctg
tcgaggccggggcgaggccggtcgcggggcaacctgcgccgtccgagcagaggtggacgg
gtcgagtccacttctgatcggggaaggagaggaaacttcagccagaggaggagagagaac
ccgaggtcctgggacaaatctgcaggaaacactcatacagcacaaagtcaaacgcctcct
cgtcaaccgtctcctcctcctgagctcggcctgacgagcttccctcctcttcctccggct
aagattgccatggcaacggtacatgctgctaacggcaacgtcaagattccagtgaaaacc
agcagcggtgaatcggtcccagcaaggtctcaagagccccaaccaatcgaagagcagaat
gtgacggagcgtgcggagacgaccggcgaggcccaaccagctcagcttacacaggaacaa
gtcgcagagtccaagaggccgagctacgcccagatctgccagagagtatcgtccaatgag
ccggtgcctcccgctgacctcgcccctacagaggcagtgcaggtcccaagtttcccgggc
ccggcatccaaaccagatgggttgccacagtaa
DBGET
integrated database retrieval system
