Etheostoma cragini (Arkansas darter): 117938021
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Entry
117938021 CDS
T07493
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117938021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117938021
Cell adhesion molecules [BR:
ecra04515
]
Cadherins
Major cadherins
117938021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_2
Cadherin_CELSR2_9th
Stevor
RET_CLD1
Fibulin_C
DUF443
ASFV_J13L
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
117938021
NCBI-ProteinID:
XP_034718232
LinkDB
All DBs
Position
22:complement(19872148..19967121)
Genome browser
AA seq
803 aa
AA seq
DB search
MLTRNCLLLFLWILVDEGSVSCLRPPTPPLGRSRTGREHARSLVGPMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDRGDNAVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDMDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSFFHLRVPESSAVGSAVGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNEHNQEGMIILKRPLDYESKKTYTFKVDASNAHL
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRESIAQHNISIVATKLNSPVLSSRVAV
TVHVLDINEFTPELSSPHETFVCENAKVGQVIQTFSAKDQDLPTAGQQFSFKSSKEDLKN
KNFTIRDFGNNTAGIVTKRSGFRRRLQEIYFLPVVIDDNGYPPKSSTGTLTIRVCGCEAD
GSLLTCSAEAIFLPVGLSTGALIAILLCIIILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLFRRDVKPEMKRGPRPPVSQDSADIRDF
INQRLKEHDLDNSAPPYDSLATYAYEGDGSVAESLSSIESLARDLEEDYDYLNDWGPRFK
KLAGIFGEQSETHSDSTTTENTH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaggaactgcctgctgctgttcctctggattcttgtcgacgaaggctcagtc
tcttgtttacgtccccctacaccaccactgggacggagcaggacggggagggagcacgcc
aggagcttggtgggcccgatgaggaatggggcagctggatttcaacgagtcaaaaggggc
tgggtgtggaaccagttctttgtactggaggagtacatggggtcagacccgcagtacgtg
ggcaagctgcacactgacctcgataggggcgacaatgcggtgaagtacactctctcggga
gacggggctggctccattttcacaattgaccaaacaacgggggacatccatgccttacgg
agtcttgacagggaggagaagccttactacaccctacgcgcccaagcggttgacatggac
accaataggcccctggagcctgaatcagaatttgtaatcaaggttcaagacatcaacgac
aatgagccaaaattcctagagggaccatatactgccagtgttcctgagatgtcaccagta
gggacatatgtgacgcaagtgactgccacagatgcagatgaccctacctatggaaacagt
gctagagtggtatacagcatcctccatggccagccatacttctctgttgaccccaaaaca
ggcgtgataaagacagctttgcccaatatggaccgagaggtgaaggaacagtaccaggta
ttaatccaggccaaggacatggggggccagctgggggggctggctgggaccaccaccatc
aacatcactctcagtgatgtcaacgataatccaccaaggttctctaaaagtttctttcat
ctacgagttcctgagtcctctgcagtggggtctgctgttggaagaatcaaagcccatgac
ttggacatcgggagaaatgccgaagtagagtacaccatcgtgccaggtgatggaggcgcc
atgtttgacatcaccaccaatgaacacaaccaagaggggatgatcattctcaaaaggccc
ttggactacgaaagcaagaagacatacacctttaaggtagatgcctccaatgctcatctg
gatccacgatttcaaagctttggggccttcaaagacacagcaacagtgaagattaacgtt
ttggatgtggatgagcccccggtgttcaataagccctcctatgtgatggatgtgtatgag
gacacccccgcgggcaccatcattggagcggtgacggcacaggatttagatgccagcagc
agtccagtcaggtattccattgactggaagagtgacttggacagctactttgacattgat
ccagtggagggaaccatttcaacaaacgaactccttgacagagagagcatcgcccagcac
aatatctccatcgtggcgaccaaacttaatagtccagttctgagcagtcgggtggccgtc
accgtccatgtgctggacatcaacgagttcacaccggaactctccagtccacatgagacc
tttgtgtgtgaaaatgccaaagtgggacaggtgattcagactttcagtgcaaaagaccag
gatctgccaacagctggacaacagttctccttcaaatcttcaaaagaagacttaaaaaac
aagaattttaccatccgtgactttggaaacaacacagctggaattgtgacaaagcgaagt
ggctttagacggcgtttgcaggagatctatttccttcccgtggtgatcgacgataatggc
taccctcctaagagcagcaccggcaccctgaccatccgcgtatgtggctgtgaagcagac
ggttctctgctgacttgcagcgctgaggccatctttctccccgtgggtctcagcactgga
gctctgatcgccatccttctctgtatcatcatcctgttagtaatcgtggtcctctatgtg
ggcttgagacggcaaaagaaaaaggaaacactcatgtcatccaaggaggacatccgggat
aatgtgatccactatgacgacgaaggagggggagaggaggacacgcacgcatttgacatg
gggacacttcgcaatcctaaggttgtcaaagagaacctgttccgcagggacgtcaaacct
gagatgaagagaggtcccaggccgcctgtctctcaggacagcgccgacatccgagatttc
atcaaccagcgtttgaaagagcacgacttggacaactcggcaccgccctatgactccctg
gccacatacgcatacgagggcgacggctctgtggccgagtcgctaagctccatcgagtcc
ctcgccagagaccttgaggaggactatgattacctcaatgactggggcccccgctttaag
aaactagcagggatatttggggaacagtcagaaactcattcggactcaaccaccacggag
aacacacattga
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