Etheostoma cragini (Arkansas darter): 117938096
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Entry
117938096 CDS
T07493
Symbol
nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117938096 (nphp3)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117938096 (nphp3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
AAA_16
TPR_11
NACHT
KAP_NTPase
TPR_19
AAA_22
ATPase_2
TPR_6
AAA
T2SSE
AAA_14
AAA_19
Macoilin
Motif
Other DBs
NCBI-GeneID:
117938096
NCBI-ProteinID:
XP_034718379
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All DBs
Position
22:complement(14894070..14924770)
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AA seq
1301 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKESKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDLNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCFLIFTQETKAELDVFIKKHSP
LLRRMCEGLGHFYLNVCFPEENAASYAVERKQEIERSSVCVLLVKTTVTSSVVEDCEEAF
VKNPDGHPLVLYLRTEEDHNLTGPTRQLLERVNAADKAAKIKVVDHSGSAEEGAELIYSQ
LEKVIKQELLAIQGEDVDSKDSGIEEGHEEDSDVLWDLHDEQEQIESYQQARSSTTSQLG
FQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQLQKQSPNTLFLYHFVGRPL
STSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDSI
DQIQQAERNMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSIVNAEC
QSMNLKLTKDQEKKLERHCRSATTCNALYVTLLARMMISSIAGWSLEKCLEQCLQCQDTM
SLYRLALKMMLNSFNTDREQHIMREILCLVCASHNGVSESEVLDLFPELELPVLSSVLHH
LNRLCIVTLRCGLIRFQHLQAWEAVRLEFLGGGSSSPSYREKLIHYFSQQLSQDRVTWRV
ADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKHYEKSCESDDTMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSVA
RSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYEQ
AEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADSAKTLNELGVLYYL
QNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETSEDMYERALDIR
KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVNL
AVIYCQLKKHSDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELYK
RAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPHAPR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctccttggtcagcccaggagaggtaattgaggatggatatggaggt
gaaggaggggaagcctgtgagatcccagttgaggtcaagcccaaagcccgacttctgcgc
agttcctttcgcagaggacctcgggtgattggggccagttttaaatccacaggttctgtg
gatctagagtatgctgctgagtatgaaagactccgtaaagagtatgaaatatttcgcgtc
agtaaaaataacgagatctcatccatgcaaaagaaggagtctaagctggacgaggagaac
aagaggctgagggctgagctacaggctctccagaagacctaccagaagatccttagagaa
aaagagagtgctctcgaggcaaagtatcaagctatggagagggctgccacctttgaacat
gacagggacaaagtgaaacgacagtttaagattttccgggagacaaaagaaaaggagatt
caggatctcctgcgtgccaagagggacttggaggccaaactgcaacagttgcaagctcag
ggcattcaggtctatgacctaaatgattcagactcagatgacaaccaaaccacggttact
gctgcagggacacagtgtgagtactggtctggtggtgtgctgggaagtgagccctctatg
ggtagcatgatgcagttgcaacagacattcaggggaccagagtttgcccacagtttgata
gatgtggagggaccctttgcaaatgtgagcagagatgattgggatgctgcagtggccagt
ctgcttcaggtctcccctcatgtaccccaggccttgtggagtaacacagtgcgctgcttc
ctgatctttacccaggagaccaaagcagagcttgatgtctttataaagaaacactctcct
ttgttacggagaatgtgtgagggtcttggccatttctacctgaatgtctgctttccagaa
gagaatgctgcatcttatgctgttgagcgcaagcaggagattgaaaggagctctgtttgt
gtgcttcttgtcaaaactactgtcaccagctctgtggtggaagattgtgaggaggctttt
gtgaagaatccagatggccatccactagtgctctacctcaggactgaagaagatcacaat
ttgactggacccactaggcaactgctagaaagggtcaatgctgcagacaaggctgctaaa
atcaaggtggtggatcatagtggttctgcagaggagggggctgaactgatttattctcaa
cttgagaaagtcatcaaacaggagttgctggctattcaaggagaagatgttgactctaag
gactctgggatagaggagggacacgaggaagactcagatgtgctgtgggacctgcatgac
gagcaggaacagattgagtcctaccagcaggcccgtagcagcaccacctcccagttaggc
ttccagaagtatatagatcgtttgaatgacatgatagctgctccccctcccacccctcct
ctgctggtgtctggtggtccaggctcaggaaagtctctcctgctctccaaatggatcgag
cagctgcagaagcagtcccccaacaccttgttcctttatcattttgttggtcgcccactt
tccacaagctcagagccggttctcattatcaaacgcctcacagtcaaactgctgcagcac
ttctggtctatttctggcttgtccatggagcccagtaagatcttagaagagtttcctcgc
tggcttgaaagactatcagcacgccatcaaggaaacatcatcatcatcattgactccatt
gaccaaatacagcaagcagaaagaaacatgaagtggctgattgaccctctgcctgtcaat
gtcagagtggtggtgtctgtcaatgtagagacatgtcctcaagcttggaggttatggccc
acactccatttagacccactgagtcccagagaggtcaggagcattgtaaatgcagagtgc
caaagcatgaatctcaaacttaccaaggaccaggagaagaaactggaaaggcactgtcga
tctgcaacaacctgcaatgcattgtatgtcacactactggcaagaatgatgatcagcagt
atagcaggttggtcactggagaagtgcctggagcagtgtctacagtgccaggacaccatg
tcactctaccgtctggcactgaagatgatgttgaactcctttaacacagacagagagcaa
cacattatgagagagatactgtgtcttgtatgtgccagccacaatggagttagtgaatca
gaggtacttgaccttttcccggaactggagttgcctgtcctgtcctctgtgcttcaccat
ctgaacagactctgcattgtaaccctccgttgtgggctcatcaggtttcaacacctgcag
gcttgggaagctgtgaggttggagtttctgggtggaggaagtagctcgccttcttacaga
gagaaactcatacactactttagtcagcaactcagccaggatcgtgttacgtggcgtgtt
gcagatgaactgccatggctgctccaacagcaggaggataggactaaactacagcttagc
ctcctgaacctgtttgtctcacaaaacctctacaagaggggtcatttttctgagctgctg
gcctattggcaatatgtgggcaaagacaaaagctccatggccactgagtactttgactcc
ctaaaacactatgagaagagctgtgagagcgacgacaccatgaccaagctggcaaacctg
tatgagaccttgggacgtttcctcaaagatctgggcctccctagtcaggctgtagcacct
ttacagaggtcccttgagattagggagacagccttggacccggaccatcccagcgttgct
cgctctctgcaccagctggccggggtttatgttcagtggaagaagtatggtaacgctgag
cagctgtacaagcaggccctggagataagtgagaacgcatacggagcggagcatgcaagc
gtagcacgagagctggagtcacttgccatgctctatcagaaacaaaacaaatatgaacaa
gctgaaaaactcaggaagaggtcagtgaagatccgtcagaagactgctcgccagaaaggt
catatgtatggctttactttgttgaggcgcagagccctacagctggaagagctgaccctg
ggaaaagactctgccgactctgccaagacacttaacgaactgggtgtcctgtactacctc
caaaacaacctagatgcagccaagatgttcttgacccgctctctggagatgcgtcaacgt
gtcctcggtccagatcacccagactgtgctcagtccctcaacaacctggctgcactgcac
acagagagaagggagtatgagacgtctgaagacatgtatgagagggcgctagatattcgc
aagagggccttgtccccagaccacccctcactggcatacacactcaaacacctggccatg
ctctataaacgcagaggaaagctggaaaaggctgtgccactgtatgagctgtctctggaa
atcagggaaaaaagttttgggcccaagcaccctagtgtggccacagcactggtcaacctg
gctgtgatctactgccaactaaagaagcacagtgatgccttgcctctttatgaacgagcg
ctgaaagtgtatgaggatagtttggggcgctcacacccacgggtcggagagactctaaaa
aacttggctgtgctaagctatgaagagggtgacttcgagaaggcagcagagctttacaaa
cgtgcaatggagataaaggaggcagagccatcgttggtgtgtgggaacgccccgtcccgc
cactcctccagtggggacacattcagtttgaggggacctgctcccctcccacacgctccg
cggtga
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integrated database retrieval system
