Etheostoma cragini (Arkansas darter): 117938101
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Entry
117938101 CDS
T07493
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117938101 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117938101 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117938101 (si:dkey-37o8.1)
03012 Translation factors [BR:
ecra03012
]
117938101 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
ecra04131
]
117938101 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117938101 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117938101 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117938101 (si:dkey-37o8.1)
Translation factors [BR:
ecra03012
]
Eukaryotic type
Elongation factors
117938101 (si:dkey-37o8.1)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117938101 (si:dkey-37o8.1)
Exosome [BR:
ecra04147
]
Exosomal proteins
Proteins found in most exosomes
117938101 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
G-alpha
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
117938101
NCBI-ProteinID:
XP_034718385
LinkDB
All DBs
Position
22:16635252..16637480
Genome browser
AA seq
457 aa
AA seq
DB search
MVKEKTHVNLVVIGHVDSGKSTTTGHLVYKCGGIEQRKLEKFEKAAAQMGKSSFKFAWVL
DKLKAERERGITIDISLLKFSTQKYTLTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGVSRSGQTREHALLAYTLGVKQIIVCVNKMDMTEPPYSQKRFDEVVRGVSGFLKK
IGYDPTTVPFVPISGWTGENMITATQKMPWFQGWKSRQREGNASGKTLLEVLDSIHPPVR
TINKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMTLMFSPTKLTAEVKSIEMHHQGLQ
TALPGHNVGFNIKNVAVKNLRRGDVAGNAQQDPPSDVSSFESQVIILNHPGKVKAGYSPV
LDCHTAHVSCRFAELKEKLDRRTGNKLEDQPQVLMSGDAATVKMVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVVKDHGSKPLHKAQVCK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagaagactcatgttaatttagtggttatcggccacgttgacagcggtaag
tcaaccaccactggccacctcgtctacaaatgtggcggcatcgagcagagaaaactcgag
aagtttgagaaagctgcagcacagatgggcaagagttcattcaaattcgcctgggtgttg
gacaagctgaaagctgagcgggagcgaggaatcaccattgatatctctctgctaaaattt
agcactcaaaaatacaccttgactataattgatgctcctggccaccgtgacttcattaaa
aacatgataaccgggacctcgcaggccgatgttgcccttctggtggtctctgcagcgaaa
ggagagtatgaggccggggtgtcaagaagtggtcagaccagggagcacgccttactggcc
tacaccctgggtgtcaagcagattatagtctgtgtgaacaaaatggatatgactgaacca
ccttacagccaaaaacgctttgacgaagttgtgcgaggtgtgagtggcttcctcaagaag
attggctacgaccccacaactgtgccttttgttccgatttctggctggactggggagaac
atgatcactgcaactcagaagatgccctggttccagggctggaaatccagacaaagggaa
gggaatgcgagtgggaaaactctactagaagtcctggactcgattcacccaccagtgcgc
accatcaacaagcctcttcgattgcctctgcaggatgtctacaaaattggaggagttggt
actgtgccagtgggtaagattgaaactggcatcctcaaacctggcatgaccctgatgttt
tcccctaccaagctcactgctgaggtgaagtccattgagatgcaccaccaggggctgcag
acggctctgccaggacacaatgttggcttcaacattaagaacgtggctgtcaagaacctg
cggcgtggggatgtggctggcaatgcccagcaggatcctccgtcagatgtcagcagcttt
gaatctcaggtgatcattctgaaccatccagggaaggtgaaagctggctactctcctgtc
ctggactgccacacagcccatgtaagctgtcgctttgctgagctgaaggagaagctcgac
cggcgcactggcaataaactggaggaccagccgcaggtcctgatgtctggagatgctgct
acagtcaaaatggttcccatcaagcccatgtgtgtggagagcttcttcacttaccctccc
ttaggtcgctttgcagctagagacctgaagcagacagttgctgtaggtgtcatcaagtcg
gtggtgaaggaccatgggtcaaaacctctccacaaagcccaagtgtgtaaataa
DBGET
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