KEGG   Etheostoma cragini (Arkansas darter): 117938121
Entry
117938121         CDS       T07493                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117938121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecra03041]
    117938121
Spliceosome [BR:ecra03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117938121
 Complex B
    117938121
SSDB
Motif
Pfam: RRM_1 DUF1543
Other DBs
NCBI-GeneID: 117938121
NCBI-ProteinID: XP_034718435
LinkDB
Position
22:16869819..16878077
AA seq 540 aa
MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLSQQMGIPQAVMAAQAPGVITGV
TPVRPPIPVLPQVGLVNPVLASPPVLSNQVGGTNHQERKEEKEEMLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGCVNRVIIY
QEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcggttacagaaactgcgggaggagaagctctgacgatggagaatggacagggcaca
ggctccaagcttggcctgccgcctcttaccccagagcagcaggaggcacttcagagggca
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcagaccattgcccat
cagcaacaacagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcaacgtgccctagccatcatgtgtcgg
gtgtatgtgggctccatatactatgagcttggtgaggacaccatcagacaagcctttgcc
ccctttggcccaatcaagagcatagacatgtcttgggattctgttacaatgaaacacaag
gggtttgcctttgtggagtatgatgtgccagaagctgctcagctggctctggagcagatg
aactcagtcatgctgggggggagaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcgcgcgcctttaatcggatctacgtg
gcgtccgtccaccctgacctgtcagatgatgacatcaagagtgtgtttgaagccttcgga
aggatcaagtcttgcacgttagccagagaccccaccacagggcgacacagaggctttggc
ttcattgagtatgaaaagcctcagtcagccctggatgctgtgtcttctatgaacctcttt
gacctggggggtcagtacctacgggtgggcaaagcagtgaccccgcccatgcccctactg
acccccacaacccctggtggtctgccgccggctgcagctgtggccgcagcggcagccacc
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagccggcgcatcggtcctgggagcgttagccgcgccccaacttctcagtcag
caaatgggaatacctcaggctgttatggctgcccaggccccaggtgtcatcacaggtgtg
actccagtgcgtcctcccataccagtgcttccccaggttggtcttgtgaaccctgtgctt
gcatcacctccagtcctgtctaatcaagttggtggcaccaaccaccaagagcggaaagaa
gagaaagaggagatgctgcaggatggcacagggcaagagatgttgagtgaccaagaacac
atgagcatttcaggcagcagtgccagacatatggtgatgcagaaactgcttagaaaatca
gagtccacggtgatggtgcttcgaaatatggttggaccagaagacattgatgacgacctg
gagggtgaggtgacggaagagtgcggcaagtttggctgtgtcaacagagtcatcatatac
caagaaaagcaaggagaagaagaggatgcagatatcattgtcaaaatatttgtagagttt
tccatggcctcagagatgaacaaagcaatccaagcccttaatgaccgctggtttggaggt
cgcaaagttgtcgcggaggtgtatgaccaagaccgtttcaacagcagtgacctctctgca
taa

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