Etheostoma cragini (Arkansas darter): 117938242
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Entry
117938242 CDS
T07493
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117938242
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117938242
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117938242
NCBI-ProteinID:
XP_034718654
LinkDB
All DBs
Position
22:1288675..1299946
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AA seq
512 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSMYNSPNSGISSMGDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEETAITMVNYYTTVTPHIRNVPV
FIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVSLNVKYNNDKSRDYTRPELPAGDGQPSIDHSVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQAGSSGVLLVSNLNEESDFSGWVYGDVQRVKILYNKKDSAL
IQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDYANSPLHRF
KKPGSKNFQNIFPPSATLHLSNVPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKMALIQMS
TVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggagtgaagagaggatcagatgagctgagtatg
tacaacagtcccaactcaggcatcagcagtatgggtgatggggcttccaatggcagtgac
agtaaaaagctgagggtggaggaggccccaccatctcgtgtgctccacatcaggaaactg
cccaacgaggcctcagaaaccgaagtcattgcccttggcttgccttttggcaaagtcacc
aatatcctcacactgaaggggaagaaccaggcgttcttggagatggggacggaggagaca
gccatcactatggttaactactacaccactgtaactcctcatatccgcaatgtccctgtc
tttattcagtactccaatcacaaagaactcaaaacggatgctggcaatcagcggacccag
gctgtgcttcaggcagtgtcggcggtccagtccggcggttcacccagctcagatgtacag
gaggctctggctgcggcctccagtcctgtgctgcggatcatcattgataacatgttctac
cctgtaacgctggatgtgctgcaacagattttctccaagtttggcacagtcatgaagata
atcacattcaccaagaataatcagttccaggcccttctgcagttcagcgatcctgtcaat
gcacagcaggccaaactggcgctggatggccagaacatctacaactcgtgttgcacgctg
cgtattgacttctctaagctggtcagcctgaatgtcaagtacaacaacgataagagtcgc
gactacacgcggcccgagctgcctgctggtgacggccagcccagcatcgaccactcggtg
gctgctgccttctccaaagactccaactccctcctcggtaagatcccaggagccctgaac
cctctcagcgcggcggcggcggcagctgctgctgcaggaagggtggccctcgctggacag
gcgggctccagcggggtgctgctggtcagcaacctcaacgaggagtctgatttctctggc
tgggtgtacggcgatgtccagagggtgaagatcctttacaataagaaggacagcgctctc
attcagatgtccgatgccaaccaggcccagctagcaatgagccacctgaatggccaaaag
atgtacgggaagatcatccgggtgacgctgtccaagcaccagacggtggcgctgccccgt
gacggcctagacgaccagggcctgaccaaggactacgccaactccccacttcaccgcttc
aagaaacctggctccaagaatttccagaacattttcccgccatctgccacccttcacctc
tccaacgtcccacaagatgtgacggaggatgacctgcggctgctcttctccaacgctgga
ggcactgtgaaagcattcaagtttttccaggatcgcaaaatggctctgatccagatgtca
acagtggaggaggccatccaggccctgatcgacctgcacaactacaacatggggggcaac
cagcacctgagagtctccttctccaagtccaccatctag
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