Etheostoma cragini (Arkansas darter): 117938319
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Entry
117938319 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04217
Necroptosis
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117938319
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117938319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117938319
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117938319
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117938319
Multi subunit type E3
LUBAC complex
117938319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
ANCHR-like_BBOX
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117938319
NCBI-ProteinID:
XP_034718747
LinkDB
All DBs
Position
22:21096163..21135226
Genome browser
AA seq
1110 aa
AA seq
DB search
MSSPASVQMDEVRRRSQSLLSSSGSAQDVRAEVQTMAGVPLSLSEKYRHFDVEAMLRENM
ACHDRQEVLESLSRLVKALSILEKYGCNLTSPARPRYWRSVKHNNPVFRTTVDAVKGGRR
VLYLYGYTNQQIDGLSFPDEVTEPDTAKVAAVTLEVMTLRTEVDMLIKGTHPHPECFKDI
IPFIIQEDQLASDTVVILPGEEQQADQPLVPLKPTQGHGGQPLKPSTGSSAASDCNLCGA
PSSLVCPSCDNQHFCDACDDLFHRHPSRESHKRERIQKTTQVICTICGISAVHAQCSTCV
QRLCENCDKLFHSHPDRKGHDRTIITSVKTSSPSLSPWECAHCTTVNEMRAVLCTTCERP
RLATPASTAQESPMSLPTSPNAEWQCKSCTVVNQGSSILCEVCERPRLATRPPVAPVLSS
PGSLADSGTKWMCQFCTYMNTNPTVVCEMCNLSPKDSAAVSLPQSLEQTPSSTKDQLQLG
VRPRPKPRVNVEVKRQKMMREDGLFLIHQIREAEKLGVSAEEVYAAICMCGGSNTNPCDW
LKSELPHLLDEICAMAASVQLNYKAGEPGTLPVVKRDGGEGVTSGPNVPGEGVKLSRAEA
KLAWLSAGGDTERAVRQLLRDRKLKMKELHSLGFRDVLKCEEALRLSGGEVKGALSLLQR
PLLEPFHQRIWTDQPEPPIDPKHPDKQRMCRRLLALYDLPSWGRCELVLSLLQEPDATYS
LEDVVHAVKESHDKDFIKRLLINECPICLSIFPRSKMQSLTSCQCSVCHECFGQHFTIAV
KEKHIRDMVCPVCGEPDINDPEQLDSYFSTLDIQLRGCLEQDVYDLFHKKLTEHALMKDP
KFLWCCHCTSGFINDGDQLKVTCPSCRRSFCAQCKKPWEPQHQDLSCEQFQQWKRDNDPE
YQRQGLAGFLRDNGITCPHCRFQYALTKGGCMHFSCSQCRYQFCSGCNNPYYKMPCKTAH
CSYKGLHAHHPRDCLFYLRDWEPPRLQALLQRSDVAFNTDPSNGTQTEACCVMEQKDEAG
QQIDSPCGVQTQPGQAGLCEKHYREYLVSLINAHSLDPALLYEPNELIRACERYLVDTQR
PETDDDTSYHARLLKKLMEVPLGEKVPRNK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccagcctccgtccagatggacgaggtcaggaggagatcccagtccctgctg
tcctcctcgggttcagcccaggacgtgagggcggaggtgcagaccatggccggcgtcccc
ctttcgctgtcagagaagtaccgtcactttgatgtggaggccatgttgagggagaacatg
gcctgccacgacagacaggaggtgttggagtctttgagtagactggtcaaggccttgagt
atcctggagaagtacggctgtaacctgaccagtcccgccaggcccaggtactggaggagc
gtcaagcacaacaacccggtcttcagaaccacggtggatgctgtcaagggaggccggcga
gtcttgtatctctacggttacaccaatcagcagatagatggcctcagtttccccgatgag
gtcactgaaccggacactgccaaagttgccgcggtgacgctggaggtcatgaccttacgt
acagaggtagacatgctgattaagggcacccaccctcacccagaatgcttcaaagatatc
atcccattcatcatccaggaggaccagctggcaagtgacactgtggtcatcctgccggga
gaggagcagcaggcagaccaacccctggttccacttaaacctactcagggccacgggggg
caacctctgaaaccatcaacgggctcttcagcagcgagtgactgtaatctgtgtggcgcc
ccttcgtctcttgtctgcccatcttgtgacaatcaacatttctgtgatgcatgtgatgac
ctctttcaccgccacccctccagagagagtcacaagagagagagaatacagaaaaccaca
caggtgatctgcaccatctgtgggatttctgctgtgcacgctcagtgctccacctgcgtc
cagaggttgtgtgagaactgtgacaagcttttccactctcaccctgaccgcaaaggacat
gacagaactatcattacgtcagtcaaaacgtccagtccatctctgtcaccctgggagtgt
gctcattgcacgacagtgaacgagatgcgagccgtcctctgcacgacctgcgaacggcct
cgactcgctacgcctgcatccactgctcaagaaagcccgatgtcacttcccacatctccc
aacgcagagtggcagtgtaagagctgtacagtcgtgaatcaaggcagcagcatcctctgt
gaggtgtgtgagcgccctcgtctggccactcgcccgcctgtcgcaccagtgctgtccagc
ccaggatctctggctgactcaggaacaaagtggatgtgccagttctgcacctacatgaac
accaatcccaccgtggtgtgtgagatgtgcaacctgtcacctaaagactcagctgcagtt
tctctgccccagtctctcgagcagactccgtctagcaccaaagatcaactccagctgggt
gtgaggccccgaccgaagcccagagtcaacgtggaggtgaaaagacagaagatgatgagg
gaagacggcctctttctcatccaccagatcagagaagcagaaaagctcggcgtcagtgca
gaggaggtgtacgcggccatctgcatgtgcggcggcagcaacaccaacccctgcgattgg
ctgaagtcagagctgcctcacctgctagatgaaatctgcgccatggcggcttctgtccag
ctaaactacaaagcaggggaacctgggacactacccgttgtgaagagagacggaggggag
ggggtgacgagcggcccaaatgtccccggtgaaggtgtgaagctgtccagagccgaggcc
aaactggcctggttgtcagcgggcggagacaccgagcgagccgtgagacaactgctgaga
gacagaaagcttaagatgaaggagctccactctctgggcttcagagacgtgttgaagtgt
gaggaggccctgcggctgagtggaggagaagtgaagggggctttgtcattactgcagcgc
cctctcctggagcccttccaccagcgaatctggacggaccagcccgagccaccgattgat
cccaaacacccggacaagcagaggatgtgccggcgtctgctggcgctgtacgacctgccc
agctgggggcgctgtgagctcgtcctctcgttgcttcaagagccagacgccacttactcc
ctggaggacgtagtgcacgctgtgaaggagtcgcacgacaaggatttcatcaagcggctc
ctcatcaacgagtgccccatctgtctgagcatcttcccccgcagcaagatgcagtccctg
acgtcctgtcagtgctccgtgtgccacgagtgcttcgggcagcacttcaccatcgccgtg
aaagagaagcacatccgagacatggtgtgtcccgtctgcggcgagccggacatcaacgac
cccgaacagctcgacagttacttttccacactggacatacagttgcgtggctgcctggag
caggacgtgtatgacctgtttcataaaaaactgactgagcacgctctaatgaaagaccca
aagttcctgtggtgctgtcattgcacctctgggtttattaatgatggagaccagctgaag
gtcacctgtccgtcttgccgccggagtttttgtgctcagtgcaagaaaccttgggagccc
cagcaccaggatctgtcctgtgagcagttccagcagtggaagagggataatgatccagag
taccagagacagggcctggccggcttcctgagagacaacggaatcacctgtcctcactgc
aggttccagtacgcgctgacgaaaggcggctgcatgcacttcagctgctcccagtgcagg
taccagttctgcagcggctgcaacaacccctactacaagatgccgtgtaagaccgcccac
tgcagttacaagggtctacatgcccatcacccccgggactgtctcttctacctcagagac
tgggagccacccagattacaggccctcctgcagaggagcgacgtggcgttcaacacagat
ccttctaatggaactcaaactgaggcttgttgtgtgatggagcagaaagatgaagcaggt
cagcagattgattcaccgtgtggggtccaaacccagccgggacaagctggcctctgcgag
aagcactacagggagtacctggtgagtctgataaacgctcactccctggaccccgctctg
ctctacgagcccaacgagctgatccgggcctgtgagaggtacctggtggacacccagaga
ccagagaccgacgacgatacctcctaccatgctcggctgctcaagaaactgatggaggtg
ccgcttggagaaaaagttcctcgaaacaaataa
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