Etheostoma cragini (Arkansas darter): 117938474
Help
Entry
117938474 CDS
T07493
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117938474
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117938474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117938474
NCBI-ProteinID:
XP_034718998
LinkDB
All DBs
Position
3:2018171..2037037
Genome browser
AA seq
2109 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHPTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLNEEHLSLAQQSSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PISPNPKEVQEDKMEDTDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPPVVPQGSVN
TSGSLCGAQQGQAAHRDPAMSSVTLTPPTSPEEAQTDYQPAQRWLKLSSASDGYSSNNTL
HGGKIPRRLASQMVESVWQECNINRTGNKRKFTMLTNGTCEEESDKTGLWDFVECTHRPH
CTCSRHKNQKQRSSSTSGHPLSSGQPAQPAPKHKLGEKLEKGEKQQKRPQTPFHHRNSVS
EEPTLEPQTQRLCLRSQEEGSYPSLHHVDTVSSKAPTLHTHGPPADLVGSPPPPPLSPHP
CDHVEGDMTPSGMKNSSTPIHQPFYPPSVEPCLMPQKGSSEGAQLENMPLPFPPAYSETL
EPTVFLGSAINPNEDSTHNPWKYFNLPRKKASHFSTPQLPVDKIREDSGGGGGTESVVSV
TELMSGSAYPLKVSQELIKTYAQRRNSHLASAAGDGEHSDEPDPYAFVEGDDEFSFTEKK
DKSGSEREGKKHKVDEGAGTADDGQGPSGSKPLASTSLIHENDLAVSYSDLDKIFNSDED
ELAPGSKRAGAGTEDKFGCKDNKAATLDPLSSISSADLHQMFPTPPSLEQQGYSPMNSGS
KDSMEAGTGLTLLDGSQLNNHFKMEVEEGLCSPKPSKVKDFSFVYKPETCRLLIGCSMYA
PLKMLPSQCMLPIKVPEDCVYTPSWTMGKMELIPPVTNVNLLTKDSNVPSVEQDYSQTYT
PFMSSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYDNSDLYSPA
STASTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNMNIRGA
DVGVYLKDNGEAQYPCTCGFSAVTNRRFGQLAGLFLEDELDVVVRGSDASRDTERCFEEL
RASTTHKAGSLTEKPPDELILLLQDQCTNPFAPMAGVEYPKQSSAPSSFLRVEERDCYND
CYMALEHGRQFMDNMSGGKVDETLVKSTCLHQWPKCKSADMSKLFSQDVLRVLLSLQPVL
QDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSP
FGLPYWEKLLLDPFGSQRDVGYVVICPENEALLRGAKSFFKDLSTIYEACQLGQHRPICK
SHPEGVLKVGTTEGKSMAEQPLSDWFLKMAARDGNNEAFNKLKLFAQVCRYDLAPYLSEQ
SLDSSLLSQRSPVVASSSSFQTSSASSGPQSTNTTSTSSAQPAPVNSTTPSSSSGSQTIA
GMAPAKPSSYSPFGTAGLQGGTSQNGPQSNSQVAGGLAENGPSANQPQGPTESPESTMER
DKVGKPTDGESHAVSYPPAIVVYIVDPFSYEDAVREVHSSAYTLGLLRCYMEMLQFLPAY
IRNAVSVQIVPCQYLLQPVRSGERHLYGQHLKSLAFSVFTQCRRPLPNSTNFKALTGFGP
GLAIDMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQ
RWLLASCTDQHGELLETCIISIDVPNRARRKKGSARRVGLQKLWEWCLGLVQVTSLPWRV
VIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRLCGISAADTPSILSACLVAMEPQ
GSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNTNAPEPID
INFNPINPDGSDGMGIFDLFDNDMVDPDLINILPNSPTTSPVHSPGSHYHQGGDGNKGQS
ADRMESHEEALNILQQPMALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVS
SVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLTQ
MYNFIMNML
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaatctcttc
tgcctggctgatttgaccggaatcaaatggcgacgttttgtgtggcaaggacccacgtct
tcgcccatccttttccctgtgaccgaagaggaccctatcctgtgtagtttcagccgatgc
ctggcggcagatgtgctaagtgtgtggagaaggcaccccaccccgggtcgcagagagctc
tggcttttctggtggggggatgaccccagttttgctgagcttattcataatgagctttca
agtgaggaggatggggagtgggagagtggcctgtcctacgagtgtcgaacgctcctgttc
aaagccatccacaacctgttggagcgctgtctcatgaaccgtggctttgttcgcatcggc
aagtggtttgttaagccataccagaaggaggagaagaccattaataaaagcgagcacctg
tcctgcgcattcaccttctttgtacatggcgacagcaacgtgtgcactagtgtggagatc
gctcaacatcaacctcttcagcgcctgaacgaggagcatctcagcctcgcccagcagagc
tccagccccttgcaagtcatcttgagcccgtatggcttgaatgggaccctcaccggtcag
gcttttaagatgtcagaccaccctactcagaagcttatagaagagtggaggcaattctat
cccatcagccccaatcctaaggaggtccaggaagacaagatggaggatacggactgggag
gatgactccctggcagctgtggaggtccttgttgcgggagtgaggatggtttacccttcc
tgcctggtgcttctccccctatcggacctccctcctgtggtccctcagggctcagtcaac
acctcaggaagcctgtgtggtgctcagcagggccaggctgctcacagggatcctgccatg
tcctctgtcactctgactcctccaacgtcaccagaggaggctcagactgattatcagcct
gcccagaggtggctcaagttgtcctctgcctcggatggctacagctctaacaacactctt
catgggggtaaaatccctcgcaggctggccagccagatggtggagtctgtgtggcaggag
tgtaacataaaccgtacagggaacaagagaaagtttactatgttgaccaatgggacctgt
gaagaggagtcggacaaaactggactttgggactttgtggagtgtactcacaggccacat
tgcacctgctcaagacataagaatcagaaacagcgatccagcagcacctcaggacacccg
ctttcatcaggccagcctgcccagccggcccccaagcacaagctgggcgagaagctggaa
aagggggagaagcagcagaagaggccgcagacgccattccaccaccgcaactctgtgagc
gaagagccgaccctggaaccacagacccagaggctttgtttaagatcacaggaggagggc
tcgtatcccagccttcatcacgtggacacagtgtcctccaaagcccctacgctgcacaca
cacggtccccctgcagacctcgtcggatccccgcctcccccgccactcagcccacatccc
tgcgatcatgtagaaggtgacatgactccaagtggcatgaagaactcgtccacgcccatt
caccaaccgttctacccgccgtcagtggagccctgtctgatgccacagaagggctcatcg
gagggggctcagctggagaacatgcctctgcccttccccccggcctacagtgaaaccttg
gaacccaccgtctttttgggttcagccatcaaccccaatgaagactccacccacaaccct
tggaagtattttaacctgcccaggaagaaggcctctcacttttcgacgccccagctacct
gtggataaaatacgagaggattctgggggaggcggaggaacagaaagtgttgtgtctgtc
actgagttgatgtcgggctccgcgtaccccctgaaggtgtcccaggagctgattaagact
tatgcccagcggagaaacagccatcttgcctctgccgcaggagacggagaacacagtgac
gagcctgacccctacgccttcgtagagggagatgatgagtttagcttcacagagaagaag
gacaagtctggatcagagagagagggaaagaaacacaaggtggacgaaggagctggaaca
gcagacgatggtcagggtccatcaggcagtaaacctttagcctccaccagccttatccac
gagaacgacttggctgtgtcctacagcgacctggataaaatcttcaattcagatgaagat
gagctagcgcctggatccaaaagagctggagctggaacagaagacaagtttggctgtaaa
gacaataaagcagccacattggaccccctgtcctccataagctcagcagacctgcaccag
atgtttcccaccccgccctccctggagcagcagggttactccccaatgaactccgggagc
aaggatagcatggaagcagggacaggcctcaccctgttggacggcagccagctcaacaac
cacttcaagatggaggtggaggagggactctgcagcccgaagccatccaaagtaaaggac
ttctcctttgtatacaagccagagacgtgtcggttgttaatcggctgttccatgtacgca
cccctgaagatgctacccagccagtgtatgttgcctatcaaagtgccagaagactgtgtg
tacacgcccagctggaccatgggcaaaatggaactgatacccccagtaacgaatgtcaat
ctcctcaccaaagacagtaatgtccccagtgtggagcaagactacagccagacctacaca
cccttcatgtccagcagtgcccctcccagcaacagcggcacaggcatcctgccatcccca
gctacaccacggttctctgtgcccacgcctcgcacgccacgcactccacggactccccgc
ggcccatcgagcgtccagggctcgcttaagtatgacaactctgacctttactcccccgcc
tccactgcgtccacctgccgaccactcagctccgttgagccggccaccgtaccttccatc
cccgaggctcacagtctctacgtcaccctcatactctctgagtcagtcatgaacctcttc
aaggactgcaactttgacagttgctgcgtgtgcgtctgcaacatgaacatccgaggagcg
gacgtaggcgtgtacctcaaggacaacggcgaggcccagtacccctgcacttgcggcttc
agcgccgtcaccaatcgccgctttggccaattggccgggctgtttctggaggacgagcta
gacgtggtggtacggggctcggacgctagtcgggacactgagcggtgtttcgaagagctg
cgagcttccacaacgcacaaggctggcagcctgacagagaaacctccggatgagctaatc
ctgctcctgcaggaccagtgcaccaacccttttgccccgatggcgggtgtggagtacccc
aagcagagctctgcccccagttcatttctgagggtggaagagagagactgttataatgac
tgctacatggcactggagcatggcaggcagttcatggacaatatgtcaggaggcaaagta
gatgaaacactagtgaaaagcacctgtcttcatcagtggccaaaatgcaaatcagcagac
atgagcaagctattctctcaggatgtcctgcgggtgttgttgtccctccagcctgtgctg
caggacaccattcagaagaagaggagtgtgcgctcctggggcgttcagggaccgctcact
tggcaacagttccacaagatggctgggaggggatcatatggtacagatgagtctcctgag
cccctgcccatccccacttttttggttgggtatgagtatgattttgtggtgctgtcacct
tttgggttgccctactgggagaagcttcttttggatccttttggttcccagagagatgtg
ggatatgttgttatctgcccagaaaatgaagctctgctccgcggggcgaagtccttcttc
aaagatcttagtactatatatgaggcatgccagcttgggcaacacaggcccatctgtaag
agtcacccagagggcgtattgaaagttggcaccacagaaggcaagagcatggccgagcag
ccccttagtgactggttccttaagatggctgccagagacggaaacaatgaagcctttaat
aagctcaaactctttgctcaagtgtgccgctatgatctagctccatacctgtcagagcag
tctttggatagctccctattgtcccagcgcagcccggttgttgcctcctcctcctccttc
cagacctccagcgcctcctcaggaccccagagcaccaacactaccagcaccagctctgcc
cagccggccccggtcaacagcaccactccctcttcctcctcaggctcccaaactattgcg
ggaatggccccagctaagccaagctcttattcaccgtttggtacagcaggcttgcagggc
ggcacgtcccagaatgggccccagtcaaactcacaggttgcagggggattggcagaaaac
ggaccctctgccaatcagcctcaagggcccactgagtcgccagagagcacaatggaaaga
gacaaagtggggaagccgactgacggagaatcccacgctgtgtcttacccccctgccatt
gtggtgtatatcgtcgaccccttcagctacgaagacgccgtcagagaggtccactccagc
gcctacacactgggcctactccgctgctacatggagatgctccagttcctgcctgcatac
atcagaaacgctgtctcagtacagattgttccctgccagtatctgctgcagccggtgcgc
agtggagagcgtcacctctacggccagcaccttaagtcgctggccttctcagtgttcact
cagtgtcgtcggcctctgcccaactccactaacttcaaggctctgacgggctttggccct
ggtcttgccatcgacatggcactcaagaacccagagaggcccgagtgtttgcgtctgtat
acaccgcccttcattttggctcctgtgaaagacaagcagaccgagctcggggagacgttt
ggcgaggcctcccagaagtacaatgtcctgtttgttggctactgtctgtcccatgaccag
cgctggctgctggcctcctgcactgaccaacatggagaactgctggagacctgcatcatt
agtattgatgtacccaatcgggctcgcaggaaaaagggctcagccaggcgagtgggcttg
caaaagctttgggagtggtgtctcggcctggtgcaggtgacatcgctgccgtggagggtg
gtcattggacggctgggtagaatgggccacggcgagctgagagactggagtattctgctg
agcaggaggaacttgcagtctcttagtaaacgtttaaaggagacgtgtaggctgtgtggc
atctctgctgctgacactcccagcatccttagcgcctgtctggttgccatggagccccag
ggttcctttgtcatcatgccagattctgtgtcaacaggttcagtgtttggccgaagcacc
acactcaacatgcagacatcgcagctgagcacacctcaggacacatcctgcacacacatc
cttgtgtttcccacctcagccatggtgcaggtcaacactaacgctccagagcccattgac
atcaacttcaatcccataaatcccgatggatctgatggaatgggcatctttgacctgttt
gacaacgacatggtggatccagacctcatcaacatcttacccaactcccccacaacctcg
cctgttcactcccctggctcccactaccaccagggaggagatgggaacaagggccagagt
gccgaccgtatggagtcccatgaggaggccctgaacatcttgcagcagccgatggcgctg
ggctactttgtctccacagccaaggctggaccactgcctgactggttctggtctgcctgc
cctcaagcccagaaccagtgcccactcttcctcaaggcctctctgcacctgcacgtgtct
tctgtccaatcagatgagctcctgcacagtaaacactcccacccactggactccaaccac
acctctgatgtgctcagatttgttctagagcaatacaacgccctctcctggctgacatgt
gaccctgcgacccaggaccgacgctcctgtctgcctgttcactttgtggtgctcacccag
atgtacaactttatcatgaacatgctctga
DBGET
integrated database retrieval system
