Etheostoma cragini (Arkansas darter): 117938479
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Entry
117938479 CDS
T07493
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117938479
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117938479
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117938479
04121 Ubiquitin system [BR:
ecra04121
]
117938479
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117938479
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117938479
Membrane trafficking [BR:
ecra04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117938479
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117938479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Motif
Other DBs
NCBI-GeneID:
117938479
NCBI-ProteinID:
XP_034719001
LinkDB
All DBs
Position
23:12072105..12093030
Genome browser
AA seq
1041 aa
AA seq
DB search
MAEGGAADLDTQRGEVAALLKTQLKKGDTWYLVDSHWFKQWKKYVGYDSWDKYQMGDQNV
YPGPVDNSGLLRDGDVLAIKEHLIDELDYILVPTDGWNKLVSWYGLTENQEPIARTVVEQ
GMFVKHCKVEVYLTELKLCEDSNMDNVITRRFSKADTIDMIEKEMRKLFSIPDEKETRLW
NRYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKSEDGSWPRGSTAPKSSGASNLSALPK
ISPSSLTNNHNSSFNSRNVKNSSYGLPSYHPYSNSYDYSDQSRQSERSGLCGLSNLGNTC
FMNSAVQCLSNIPPLTEYFLKDKFTEELNEDNPLGMKGEIARVYAELIKQLWSGKFSYVT
PRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYIQLKDANGRPDKVV
AEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVCAKVSVTFDPFCYLTLPLPMKKERTLEV
YLVRLDPLAKPTQYKLTVPKVGYISDLCTSLSNLSGVPAEKMIVTDIYNHRFHRIFATNE
NLSSIMERDDIYVFELAVNRVEDTDHVVIPVHLREKYKQSGYNHTSTPLFGQPFLLAVPR
TLSEDKLYNMLLLRLCRFVRSSVEEDEEGCEETPPSKPHTVNGNATNGLLEEGSPSEMET
DEQDDESSQDQELPSENDNSQSEDSVDNELENGVVGPQNSTKGQQTAGHNRKRLFTFQFN
NMGKTDFTLIKEDTRQIRFDEGHLRLSDRSYLSLDWEPEIKKKYFDETVVEDFDKHESME
YKPQKKAFFKLKDCIELFTTKEKLGAEDPWYCPNCKQHQQATKKLDLWCLPPVLVVHLKR
FSYSRYMRDKLDSLVDFPLRDLDMSEFLINPNAGPCRYDLIAVSNHYGGMGGGHYTAYAK
NKDDGKWYNYDDSSVSPANEDQIVSKAGYVLFYQRQDTVKGTGYFALDHEEDEEEEDDEE
EGEDVENGGQERPESQTASSAQGSSAAGAAAIASGSAAAQSDEEDLNENRRRKNDNEQGD
EEEEEAEEERAPIRDVNMKTN
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaggtgcggcggatctggatacccagagaggagaggtcgcggcactgttg
aaaacacagctaaaaaagggagacacatggtacctggtggacagtcactggttcaaacag
tggaagaaatatgtgggatatgacagttgggacaaataccagatgggtgaccagaatgtc
tacccaggaccagttgataactcgggtcttctcagagatggggatgtactggccatcaag
gagcacctcatcgatgagcttgactacatcctggtccccacagatggctggaataaactt
gtcagctggtatggattgacagagaatcaggagccaattgcacgcacggtggtggaacag
ggtatgtttgtgaagcactgcaaggtggaggtgtacctgacggagctgaagctctgtgaa
gacagcaacatggacaatgtgatcaccagacgcttcagtaaagctgacacaatagacatg
attgagaaggagatgaggaagctgttcagcatcccggatgagaaggagaccaggctgtgg
aacagatacatgagcaacaccttcgagccgctcaacaaaccggacagcaccattcaagac
gccggcctctaccaaggacaggttctcgtaatagagcagaagagtgaggatggctcatgg
ccccgaggctccacggcacccaagtcatctggtgcttccaatctgtctgctttgccaaag
atctcgccttcatctctcacaaacaatcataacagcagcttcaacagcaggaacgtgaag
aattcgagctacggtctaccgtcctaccacccctacagcaacagctatgactactcagac
cagagcaggcaaagtgagcgctcaggtctctgtggactctccaacctgggcaacacatgc
ttcatgaactctgctgtgcagtgtttaagcaatatccctccactgacggagtacttcctc
aaagacaagttcacagaggagctgaatgaggacaacccgctgggcatgaaaggggagatt
gccagagtctacgccgagcttatcaagcagctttggtcgggcaaattcagctacgtcacc
ccaaggcctttcaagacccaagtgggccgcttcgccccacagttctccggttaccaacag
caggactctcatgagctgctggcctttctcttggacggccttcacgaagacttgaaccgc
atcaggaagaagccctacatccagttgaaggacgctaacggcaggcctgataaggtggtg
gcggaggaggcatgggagaaccacatcaagagaaacgactccatcattgtggacatcttc
cacggccttttcaagtccaccctggtgtgtcctgtgtgcgccaaggtctctgtgactttt
gatcctttctgctacttgaccctgccccttcccatgaagaaggagcggacactggaggtc
tatctggtcagactggaccctctggccaaacccacacagtacaagctgaccgtgccgaag
gtgggctacatctctgacctgtgtacttccctctccaacttgtctggggtgcctgctgag
aagatgattgtaaccgacatctacaaccaccgtttccatcggatcttcgccactaacgag
aacctcagcagcatcatggagagagatgatatctatgtatttgagttggcggtgaaccgg
gtggaggatacagaccatgtagtgatcccagttcaccttagggagaagtacaaacagtcg
ggctacaaccacaccagcacgcctctgttcggacagcccttcctcctcgccgtcccgaga
accctcagcgaagacaaactctacaacatgctgctcctgcgcctctgccggtttgtgcga
tcttcagtagaggaggatgaagagggttgtgaagagacaccaccatccaaaccacacact
gtcaatggtaacgccactaatggacttttggaggaggggtcgccgagcgagatggagact
gatgagcaggatgacgagtccagtcaggatcaggagctgccctctgagaacgacaacagc
cagtcagaggactctgtggacaacgaactggagaacggtgtggttggtccacagaactcc
accaaaggccaacagacggccggacacaaccgaaagagactttttacattccagttcaat
aacatgggaaaaacagactttaccctcatcaaggaggacaccaggcagatccgctttgac
gagggacacctccgactcagtgaccgctcctatctctccttggactgggaaccggagatc
aagaagaagtactttgatgagaccgttgtcgaggacttcgacaagcatgagagcatggag
tacaagcctcagaagaaggctttcttcaagctaaaggactgcattgaactttttactaca
aaggaaaaactgggagcagaggacccatggtactgtccaaactgtaagcagcaccaacag
gccactaagaagctggacctgtggtgtctgccgccggtgctggtggtccatctgaaacgc
ttctcctacagtcgttatatgagggataagctggactcccttgttgatttccctctcaga
gacctggacatgtccgagttcctgatcaaccccaacgctggaccctgtcgctatgacctc
attgctgtgtccaaccactatggcgggatgggtggaggccactatacggcttatgccaag
aacaaagacgacggaaagtggtacaactatgacgacagcagcgtgtctcctgccaacgaa
gatcaaatagtgtccaaagcaggctacgtgcttttctatcagcgccaggacacggtgaag
ggcaccggctacttcgctctcgaccacgaggaagacgaagaggaggaggacgatgaggag
gaaggagaagatgtggagaacggcggccaggagagaccggagagtcagaccgcctcttct
gctcagggctcgtccgccgccggtgccgccgccatcgcctccggctccgccgcagctcag
agtgacgaggaggacctgaacgagaaccggcgcaggaagaacgacaacgagcagggcgat
gaagaggaggaggaggcggaagaggagcgggcgcccattcgagacgtcaacatgaaaacc
aactga
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integrated database retrieval system
