Etheostoma cragini (Arkansas darter): 117938591
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Entry
117938591 CDS
T07493
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117938591 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117938591 (apex1)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117938591 (apex1)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117938591 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117938591
NCBI-ProteinID:
XP_034719149
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All DBs
Position
23:complement(15848981..15853281)
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AA seq
310 aa
AA seq
DB search
MKRGKKEDDAAADGDNDTGSASAKKTKKAKEPEAPIMYEDPPDQMTSKDGREANMKITSW
NVDGLRAWVKKKGLDWVREEAPDVLCLQETKCAEKSLPADITSMPEYPHKYWSASDEKEG
YSGVAMLCKTEPLKVTYGIGNEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYRKT
WDVDFRAYLSELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGFGQLLESG
FIDSFRELYPEQANAYTFWTYMMNSRGKNVGWRLDYFVLSSSLLPGLCDSKIRNKALGSD
HCPITLHIAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaaggaagacgatgcagctgcagacggagacaatgacacaggctct
gcatctgcaaagaaaacaaagaaggccaaggaaccagaggccccaataatgtacgaagat
cctcctgaccaaatgaccagcaaagatggacgtgaagccaacatgaagatcacctcctgg
aacgttgacggcctgagggcctgggtgaaaaagaagggcctggattgggtgcgtgaggag
gctccagatgttttgtgcctgcaggagacaaagtgtgcagagaaatccctccctgctgac
atcacctcaatgccagagtaccctcacaaatactggtctgcgtcagatgaaaaggagggt
tacagtggtgtggcaatgctctgcaagactgaacccctaaaagtcacctatggcattggt
aacgaagagcatgacaaggagggccgcgtcatcaccgctgagttccctaccttcttcctg
gtgacagcctatgtgccaaactccggcagaggcctcgtgcgccttgactaccgcaaaacc
tgggacgtggacttccgggcatatctgagcgagctggacatgcagaagcccctggtgctg
tgcggcgaccttaacgttgcgcaccaggagatcgatctgaagaacccaaaggggaacaag
aagaatgccggcttcacccccgaggagcgcgagggcttcggccagctgctggagtccggt
ttcatcgacagcttccgcgagctctaccccgagcaggccaacgcctacaccttctggacc
tacatgatgaactcccgcggaaagaacgtgggctggaggcttgactactttgtactgtcg
tccagtcttctgccaggcctgtgcgacagcaagatccgcaacaaggccctgggaagcgac
cactgccccatcactctgcacatagctgtgtag
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