Etheostoma cragini (Arkansas darter): 117938606
Help
Entry
117938606 CDS
T07493
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117938606 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117938606 (cald1a)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117938606 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
117938606
NCBI-ProteinID:
XP_034719180
LinkDB
All DBs
Position
23:11591211..11649533
Genome browser
AA seq
627 aa
AA seq
DB search
MEEMDFERRRELRRQKREEMRLEAERLAKNDDDEEEAARERRRRARQERMKGREGDEPSG
QPDSLVMTNSHSVTETVSVSSFYGGGEGGGDNEDQALLDRMAKREERRQRRMQEALERQK
ELDTTRTEVMEKNNAEEERPSSWGRGRYHDNEDEEEKTETYSSRREEKEQEEEEAAPEGE
EEADEGLDEEEEQKVEVVEDQPRRSYLREQESTEEPKIQNKEPAEEETHSVVSEISNQAN
STNPKSEEDAVASEEVPEDDYLDHSSENKSMTLRNDTEEDNEVSEILHSEDDKENERGRS
RVEREEQSKLNGGLHEEEAALKQHRKPERTFSRGSVRSPEVFPGDDQDDAARLEAERKLE
ELKRRRDDAESEEFERMRQKQQEAEAELEELKRKREERRKVLEEEERQKKQEEAERKARE
EEEKRKMKEEIERRRAEAAEKRQKVEDNMDGEGRPFKCVSPRGSSLKIGERAEFLNKSAQ
KSSTMKASHSPVVSKIDNRLEQYTSAAQQRENKESRSPRSGAVDLPMVTDSIRNIKSMWE
KGNVFGSPGSGGSPFKEAAVMKTGVAGRINDWLNKTPESGKMPGGRPTDLKPVDVTNKRS
LWENKGASPTKVAGRGETKSVANGMGH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggactttgagcgtcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaagccgaacggttggcgaagaatgatgatgatgaggaggaggcggcccgcgag
agaaggcgcagggcccgccaagagaggatgaagggcagggagggtgatgagccaagcgga
cagccagacagtctggtcatgaccaacagtcacagtgtgacagagacagtgtctgtgagc
agcttttatggaggaggagaaggcggcggagacaacgaagaccaggccctgctggaccgt
atggccaaacgagaggagaggcggcagagacgcatgcaggaggcgctggaaagacaaaag
gagctggacaccaccagaacagaggtgatggagaaaaacaacgcggaagaggagaggcca
tcctcctggggtaggggtcgttaccatgacaatgaggatgaagaggagaagacagagacg
tacagctcaagaagagaggagaaggagcaagaggaagaagaggctgctcctgagggtgaa
gaggaagcagatgagggtttagatgaagaggaagagcagaaagtggaggtggtggaagac
caaccgagaaggtcttacttgagggaacaggaatcaaccgaagaacctaaaattcaaaac
aaggaacccgctgaagaagaaacacattcagtagtcagtgagatttcaaaccaggccaat
tcaacaaatccaaaatctgaggaagatgcagtagcatcagaggaggtacctgaagatgat
tatttagatcattcatccgagaataagtctatgactctcagaaatgacactgaagaggac
aatgaggtatctgagatactgcactcagaggatgataaggaaaatgaaagaggcaggtcc
agggtggagagggaggagcagagcaagctgaacggagggctgcacgaggaggaggctgct
ctcaaacagcacaggaaacctgagaggaccttcagtcgcggcagtgtgcggtcccccgag
gtgttcccaggtgacgaccaggacgacgctgcccgccttgaggcagagcgcaagctggag
gagctgaagcgtcgccgcgatgacgctgagagcgaggagttcgagaggatgaggcagaag
caacaggaggccgaagccgaactggaggagttgaagaggaagagggaggagaggaggaag
gtgctggaggaggaggagaggcagaagaagcaagaggaggcggagagaaaagccagagag
gaggaggagaagaggaagatgaaggaggagattgaaaggaggagagcagaggcagctgag
aagagacagaaggtggaagacaatatggacggggaaggcagacccttcaagtgtgtcagc
cctcgaggctcctctttgaagattggagagagagcagagttcctgaataagtcggcacag
aagagcagcactatgaaggcatctcattctcctgtggtgtccaagatagacaacaggctg
gagcagtacacctccgctgctcagcagagagagaacaaggagtctcgatccccgcgctct
ggagcggtggatctaccaatggttaccgacagcattcgaaacatcaagagcatgtgggag
aaaggcaacgtgttcggctcacctggaagtggcgggagcccgttcaaggaagcagctgtg
atgaagacaggcgtggcgggtcgcattaacgactggctgaataaaaccccggagagcggc
aaaatgccaggaggaaggccaacggacctgaagcctgttgatgtcaccaacaagaggagt
ctatgggagaacaaaggtgcttctccaaccaaggtggcaggcagaggggagaccaaatca
gtcgccaacggtatggggcactaa
DBGET
integrated database retrieval system