KEGG   Etheostoma cragini (Arkansas darter): 117938634
Entry
117938634         CDS       T07493                                 
Symbol
optn
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04137  Mitophagy - animal
ecra04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117938634 (optn)
   04137 Mitophagy - animal
    117938634 (optn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecra04131]
    117938634 (optn)
Membrane trafficking [BR:ecra04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    117938634 (optn)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    117938634 (optn)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    117938634 (optn)
  Xenophagy
   Cargo receptors
    117938634 (optn)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 DUF4795 DivIC ZMYND11_CC WipA_N EDR4-like_1st
Other DBs
NCBI-GeneID: 117938634
NCBI-ProteinID: XP_034719264
LinkDB
Position
23:complement(14681022..14693575)
AA seq 530 aa
MASGGPVMNGNISCPPGQSGTLEETLQQMNILIQENRDLKEALRQTNLTMKERFEGLSAW
REKQREERGFLENRLEEARYRMEELTLELNKRTEGEGMTGGSLLAASSNQSAELIALRAQ
VARLQAEKNDLVAMNSELQLRADNSQDDSFIEIIRVSDDGVDGMNNACGSEHRRRPEMSM
TASQLDSKELTVSQLLQSLRNETQRAEQLQAELQTSSARIIELEARKSNVEESTQTQAET
KEDSGKEEKAESEVENLKCQMRTLFKELQQAQSKLDDAEGMKKNLQDRCREVEQDVVTLK
AQLVEKQAVQSENDRLKLQVDSMQAQGQMEQRKAGEERNNLAQLKDAYTKLFEDYNELKE
EKKKRESQLVQKEVVEQLQERLTAAEEALAGKQNQIDQMKQEIYKKEEELQTISVFQAQA
EVYSSDFYAERAAREKLHEERERLAAQLEYVKKQNNHLQEEMESLGRRSLNEMQRRHVPP
GGNAGAGASLIGRGTDWQHQGNIPEHACPKCNEILPDLDSLQIHIMDCIN
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcgtctggaggccccgtgatgaatggcaacatctcttgtcctccgggtcagtcgggt
acgctggaggaaaccctgcagcagatgaacatcctcatccaggagaaccgagacctgaaa
gaggccctgcgtcagaccaacctgacgatgaaggagcgtttcgagggtctgtctgcgtgg
cgggagaagcagcgggaagagcgcggctttctggagaacaggctggaggaggctcggtac
cgcatggaggagctgaccctggaactgaacaagaggacggagggggaggggatgacaggg
ggaagcttgctggcggcgtcatccaatcagagtgcagagctgattgccctgcgtgcccag
gttgctcgcctgcaagcagagaagaacgacctggtggccatgaactctgagctgcagctg
agagccgacaactcacaagacgactccttcattgagatcatcagagtctcggatgacggt
gtagacggcatgaacaatgcgtgtggttcagaacaccgcagacgtccggaaatgagcatg
acggcgtcccagctggacagcaaggagctgactgtcagccagctcctccagtccctgagg
aacgagacgcagcgcgccgagcagctgcaggccgagctgcaaacttcttctgccagaatt
atagagctggaagcgaggaagtctaatgtggaggaatcaacacagacccaagcagagacc
aaggaggattctgggaaagaggaaaaggcagaatctgaggtggagaatctgaagtgtcag
atgagaacgctgtttaaagaactgcagcaggcccagagcaagctggatgacgcagaaggc
atgaagaagaacctgcaggacagatgtcgggaggtggagcaggacgtggtcactctgaag
gctcagctggtggagaagcaggctgttcagtcggagaacgaccggctcaagctgcaggtg
gacagcatgcaggctcagggccagatggagcagaggaaggctggggaggagaggaacaac
ctggcccagctaaaggacgcctacaccaagctgtttgaagactacaatgaactcaaagag
gagaagaagaagagagaatctcagctggtgcagaaggaggtggtggagcagctacaggag
cgcctgactgccgctgaagaggccttggcaggtaaacagaaccaaatcgatcagatgaag
caggagatctacaagaaggaggaggagctgcagaccatatctgtgttccaggctcaggca
gaggtctactcctcagacttctacgcagagcgagcagcgagggagaagctccacgaagag
agggagcgtctggctgctcagctggagtatgtaaagaagcagaacaaccacctgcaggag
gagatggaatccctgggcaggcgttcgctgaacgagatgcagaggagacatgtgccaccg
ggaggaaatgcaggagctggcgctagtctgattggaagaggtactgactggcagcatcag
gggaacattcccgaacacgcctgtcccaagtgcaatgagatcctgccggacctggactcc
ctgcagatccacatcatggactgcatcaactag

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