Etheostoma cragini (Arkansas darter): 117938634
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Entry
117938634 CDS
T07493
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04137
Mitophagy - animal
ecra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117938634 (optn)
04137 Mitophagy - animal
117938634 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117938634 (optn)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117938634 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117938634 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117938634 (optn)
Xenophagy
Cargo receptors
117938634 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF4795
DivIC
ZMYND11_CC
WipA_N
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
117938634
NCBI-ProteinID:
XP_034719264
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All DBs
Position
23:complement(14681022..14693575)
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AA seq
530 aa
AA seq
DB search
MASGGPVMNGNISCPPGQSGTLEETLQQMNILIQENRDLKEALRQTNLTMKERFEGLSAW
REKQREERGFLENRLEEARYRMEELTLELNKRTEGEGMTGGSLLAASSNQSAELIALRAQ
VARLQAEKNDLVAMNSELQLRADNSQDDSFIEIIRVSDDGVDGMNNACGSEHRRRPEMSM
TASQLDSKELTVSQLLQSLRNETQRAEQLQAELQTSSARIIELEARKSNVEESTQTQAET
KEDSGKEEKAESEVENLKCQMRTLFKELQQAQSKLDDAEGMKKNLQDRCREVEQDVVTLK
AQLVEKQAVQSENDRLKLQVDSMQAQGQMEQRKAGEERNNLAQLKDAYTKLFEDYNELKE
EKKKRESQLVQKEVVEQLQERLTAAEEALAGKQNQIDQMKQEIYKKEEELQTISVFQAQA
EVYSSDFYAERAAREKLHEERERLAAQLEYVKKQNNHLQEEMESLGRRSLNEMQRRHVPP
GGNAGAGASLIGRGTDWQHQGNIPEHACPKCNEILPDLDSLQIHIMDCIN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggaggccccgtgatgaatggcaacatctcttgtcctccgggtcagtcgggt
acgctggaggaaaccctgcagcagatgaacatcctcatccaggagaaccgagacctgaaa
gaggccctgcgtcagaccaacctgacgatgaaggagcgtttcgagggtctgtctgcgtgg
cgggagaagcagcgggaagagcgcggctttctggagaacaggctggaggaggctcggtac
cgcatggaggagctgaccctggaactgaacaagaggacggagggggaggggatgacaggg
ggaagcttgctggcggcgtcatccaatcagagtgcagagctgattgccctgcgtgcccag
gttgctcgcctgcaagcagagaagaacgacctggtggccatgaactctgagctgcagctg
agagccgacaactcacaagacgactccttcattgagatcatcagagtctcggatgacggt
gtagacggcatgaacaatgcgtgtggttcagaacaccgcagacgtccggaaatgagcatg
acggcgtcccagctggacagcaaggagctgactgtcagccagctcctccagtccctgagg
aacgagacgcagcgcgccgagcagctgcaggccgagctgcaaacttcttctgccagaatt
atagagctggaagcgaggaagtctaatgtggaggaatcaacacagacccaagcagagacc
aaggaggattctgggaaagaggaaaaggcagaatctgaggtggagaatctgaagtgtcag
atgagaacgctgtttaaagaactgcagcaggcccagagcaagctggatgacgcagaaggc
atgaagaagaacctgcaggacagatgtcgggaggtggagcaggacgtggtcactctgaag
gctcagctggtggagaagcaggctgttcagtcggagaacgaccggctcaagctgcaggtg
gacagcatgcaggctcagggccagatggagcagaggaaggctggggaggagaggaacaac
ctggcccagctaaaggacgcctacaccaagctgtttgaagactacaatgaactcaaagag
gagaagaagaagagagaatctcagctggtgcagaaggaggtggtggagcagctacaggag
cgcctgactgccgctgaagaggccttggcaggtaaacagaaccaaatcgatcagatgaag
caggagatctacaagaaggaggaggagctgcagaccatatctgtgttccaggctcaggca
gaggtctactcctcagacttctacgcagagcgagcagcgagggagaagctccacgaagag
agggagcgtctggctgctcagctggagtatgtaaagaagcagaacaaccacctgcaggag
gagatggaatccctgggcaggcgttcgctgaacgagatgcagaggagacatgtgccaccg
ggaggaaatgcaggagctggcgctagtctgattggaagaggtactgactggcagcatcag
gggaacattcccgaacacgcctgtcccaagtgcaatgagatcctgccggacctggactcc
ctgcagatccacatcatggactgcatcaactag
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