Etheostoma cragini (Arkansas darter): 117938821
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Entry
117938821 CDS
T07493
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117938821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117938821
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117938821
Membrane trafficking [BR:
ecra04131
]
SNARE
SNARE associated proteins
Others
117938821
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
117938821
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117938821
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117938821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
117938821
NCBI-ProteinID:
XP_034719619
LinkDB
All DBs
Position
23:complement(18868116..18876271)
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AA seq
435 aa
AA seq
DB search
MAEDGRDESVATDEESDNTAADGSNSLNNTMVEEGSTLVRRMEICVAEAEKRSGKNAVNM
QETFTVYLIETRPMDAVAEGRNPAPDSLWRRYSEFELLRNYLLVTYPYIVVPPLPEKRAE
FVWHKLSADNMDPDFVERRRIGLENFLLRVASHPVLSNDKILHHFLTEEHGWKEVVYETG
FQAKADSRIRALSATFRVRNPDKRFMEMKHYSDELQSHTSQLLRARARVADRLYGVYKVH
GNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASIDDILEEEEHYADQLKEYLFYAESLR
AVCRKHELTQFEFEMASQDLISKKQQHEELTTGIVRTFSFKGMTNKLFGQEAPVQREARI
KLLEELIAEGEDSVKEKTVECKEHVERAWVDMQRFKEQKDKDLREALINYAVMQISMCKK
GIQMWSNAKECFLKM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatgggagggatgagtcggtggccactgacgaagagtcagacaacacagct
gcagacgggagcaacagcttaaacaacacgatggtggaagagggctccactctcgtgcgc
agaatggagatctgtgttgctgaggctgagaaaagaagtggtaaaaacgcagtgaacatg
caggaaacgtttactgtgtacctcatcgaaacacggcccatggatgcagtcgcggaaggt
cgtaacccagctcctgactctctgtggaggagatacagtgaatttgaactgctgcggaac
tacctgttagttacctatccatacatcgtggtcccccctttgcctgagaagagagcggag
tttgtgtggcacaagctgtctgcagacaacatggacccagactttgtggagcggcgcagg
atcgggctggagaactttctgcttcgtgtggcatcacatccagtcctctccaatgacaag
atcctccaccactttctcactgaggaacatggctggaaggaagtggtgtatgagacagga
tttcaggcaaaggccgattccaggatcagggctctcagtgccaccttcagggtgagaaat
ccagataaacgcttcatggagatgaaacactacagcgatgagctgcagtctcacacatct
cagctgctccgagcacgggcaagggttgcagatagactctacggtgtttacaaggtccat
ggaaactatgggagagtcttcagtgagtggagcgccatagagaaagagatgggggatgga
ctgcaaagtgccggtcatcatatggatgcatatgctgcctcaattgatgacatcttagaa
gaagaggaacattatgcagaccaactgaaagaatatctcttctatgctgaaagtctgagg
gcagtgtgcaggaaacacgagctgacccaatttgagtttgagatggcctcccaggacctc
atctcaaagaagcagcaacatgaggagctgactacagggattgtgcggacgttctccttc
aaaggcatgaccaacaagctttttggccaagaggcacctgtgcaaagggaggccagaatc
aagctgctggaggagctaatagcagagggtgaagacagcgtcaaggagaaaacagtcgag
tgcaaagagcatgttgaaagggcgtgggtggatatgcagcgctttaaggagcagaaagac
aaagatctgcgagaagcgctcatcaactatgctgtcatgcaaatcagcatgtgcaaaaag
ggaatacaaatgtggagcaatgccaaagaatgtttcctcaagatgtaa
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