Etheostoma cragini (Arkansas darter): 117938835
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Entry
117938835 CDS
T07493
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117938835 (usp6nl)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117938835 (usp6nl)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
117938835
NCBI-ProteinID:
XP_034719633
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Position
23:complement(1884825..1936200)
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AA seq
898 aa
AA seq
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MQVLQIVKELVSPSRRRAAARFGASDQDATVKLDQERAEIVAKYDKGKEATVEPWEDTNF
HLYKVIDRFGFVHKNELPSYDSVEERQKHMEVERTTKWLKMLKSWDKYKNSEKLARRVYK
GIPLQLRGQVWGLLLDIPKIKEEKKDFYEKLKARARGVSPDIRQIDLDVNRTYRDHIMFM
NRYDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQKHA
MHGFFIPGFPKLIRFQDHHDRILKKMMPKLKQHLDNQEVLTSLYTMKWFFQCFLDRTPFT
LTLRIWDIYILEGERVLPTMSYTILKLHKKHLMKLSMEELVEFLQVTLSKDFFFEDDFVV
EQLQASMTELRKAKLELPAPGKEDEYPKKPLGQLPPEVAAAAVNHVANGQSHTEPVEATR
DPSPVPDRKRDSRPPSRSRRDSLEKSIRHHKADKRDARSRGSGKIPNEHQKQSTSTTPER
GATPPSAPTPAPQLITGERGKPQSHATANHNSNAASSSRKEITPRWFKPSETKLEAVKAA
AARDVHLSRGVSPAPSSPEDSVTPHRRPHSKGFIPDSNRGSNASQYDNVPGLPEQDFEIL
ELDRPPSRIRIPRSETPFSVSSLHQGSPSRTPSLAGSVASGPGMATHPLPTTFSHNSPGG
VPASYPDSQSRYHTPPQKHSPGRTTTEVPIFHPSYSVSLDHKGEDRLYAPPSRLTPPTNV
VYGERAYATTQRQSNNLSPEKALMNNSFATYRRQPPPSSSHNPRNARPHLEHSLQLETQG
SSTPIYLQQLTSTAQVYAPVDYRFEGPRRPVDGLLWAPEDGLPPQSPAGMPRSPSFQRAQ
MSPVEEFTFPPNPDGLLLYRTQFQEQQPVIRQQLPQLFGVPHYRHAQEAFAMQESMLL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctacagatcgtcaaggagctggtgtcgccgtccagacgcagggcggcagcc
agatttggagcgtctgaccaggatgctacggtgaaacttgaccaggagcgcgccgagata
gtcgccaaatatgacaagggaaaagaggccacggtggagccctgggaggacaccaacttc
cacctgtataaagtcatcgaccgctttggctttgttcataagaatgaacttccatcctac
gactcggtggaggagagacaaaaacacatggaggtggagaggaccaccaaatggctgaag
atgctgaagagctgggacaaatacaagaacagtgagaagctggccaggagggtctataag
ggaatccccctgcagctccgagggcaagtatggggtctgctgctcgacatacccaaaata
aaggaggagaagaaagacttctacgagaaactaaaagccagagccagaggagtgtccccc
gacatccgtcagattgacttggatgtgaaccgcacctacagggaccacatcatgttcatg
aatcgctacgatgtcaagcagcaagctctcttccacgtcctcacagcctactccatgtac
aacactgaggtgggctactgccagggcatgagccagattacagctctgctgctgatatac
atgaatgaagaggacgccttctgggctctggtcaaactactgtctgggcagaagcacgcc
atgcacgggttctttatccccgggttcccaaagctgatacgtttccaggatcaccacgac
cgcatcctcaagaagatgatgcccaaactgaaacaacacctggacaaccaagaggtgtta
accagtctctacaccatgaagtggtttttccagtgtttcctggacagaactccctttacc
ctgaccctcaggatctgggacatctacatcttggagggagaacgagtgctgcccaccatg
tcctacacgatcctcaaactgcacaagaagcacctgatgaagctgtccatggaggagctg
gtggagtttctgcaggtgacattgtccaaagatttcttcttcgaggacgactttgtggtc
gagcagctacaggcgtccatgacggagctcaggaaggcaaagctggagctgcctgctcca
ggtaaagaagacgagtatcccaagaagcctctagggcaacttcctcctgaggtggcagcc
gccgcagtgaaccacgtggccaacggtcaaagccacaccgagccagtcgaggctaccagg
gatccaagtcctgtaccagaccgcaagcgggacagccggccccccagcaggtcacgccgg
gactcgctggaaaaatcaatccgccaccacaaggctgacaagagggatgcccgctcccgg
ggatcgggaaaaatcccaaatgagcatcaaaagcagtccacctcgaccacacctgagagg
ggagcaacaccgccctcagctcccacccctgcaccacagctcattacaggggaaagaggg
aagcctcagagccacgccaccgccaaccataactccaacgcagcctccagctctcgcaaa
gaaatcactccccgctggttcaaaccctcagagacaaagctggaagcggtcaaagcagca
gctgcccgtgacgtccatctgagcaggggggtgtcgccggccccttccagcccagaagac
agtgtaacgccccaccgccggccacactccaaaggcttcatccctgactccaaccgcggc
tccaatgcctcccagtatgacaatgtaccagggctgccggagcaggattttgagatcctg
gagcttgacagacccccgtccagaataaggatcccccgcagtgagacacccttcagtgta
tcgtccctccatcagggcagccccagtcgcacacccagcctggcggggagcgtcgcatca
gggcccgggatggccacacaccctcttcctactacattttcccacaacagtccaggaggg
gtcccggccagctaccctgacagccagagccggtaccacacccctccccagaagcactcc
ccaggcagaactactaccgaagtccctatcttccacccctcttacagcgtaagcctggac
cacaaaggagaggacagactctatgctcccccctcccgattaaccccacctactaatgtg
gtgtacggggaacgagcgtacgccaccacccagcgccagagcaacaacctctccccagag
aaggctcttatgaacaactcctttgctacataccgcaggcagccaccacctagctcctcc
cacaacccccgaaacgccaggcctcacctggagcattccctgcaactggaaacccagggg
agctccacccctatctacctgcaacaactcacctccaccgcacaggtctacgctccggtg
gactacaggtttgaggggcctcggcggcctgtagacgggctcctgtgggctccggaggat
gggctgccccctcaatccccagctgggatgccacgctcacccagcttccagcgagcccaa
atgtctcccgttgaggagtttactttcccccccaacccagacggcctgcttctatacagg
acacagttccaggagcagcagcctgtcatacggcaacagctcccccagctgtttggagta
ccacactacaggcacgcacaggaggcgttcgcgatgcaggagtccatgctgctgtga
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