KEGG   Etheostoma cragini (Arkansas darter): 117938851
Entry
117938851         CDS       T07493                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04510  Focal adhesion
ecra04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117938851 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117938851 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 117938851
NCBI-ProteinID: XP_034719673
LinkDB
Position
23:3276325..3306884
AA seq 1780 aa
MSLIIHFVTALALWWPARAQLPEFGDVCTKGSCYPATGDLLIGRAHRLSASSTCGLKQPE
RYCIVGHLEDEKKCFVCDSRKPFNEDTNQDSHTIENLVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFRTFRPAAMLIERSMDFGKTWQVYRYFAYDCESSFPGVPSGPM
ARVDEIVCDSHYSDIEPSTEGEVIFRVLDPVFQIEDPYSLRIQNMLKITNLRVKFTKLHT
LGDNLLDSRDDVIEKYYYSLYDMVVRGNCFCYGHASECAPMDGTTFDAEGMVHGRCACNH
NTEGLNCERCQDFYHDMPWRPAEGQNTHACKKCECNHHSTSCHFDLAVYMTTGNISGGVC
DDCQHNTMGRQCEQCAPFYFQHPNRDLRDPNVCEPCNCDPSGSLQGGLCDSHNDVAAGMI
SGQCRCKANVEGERCDNCKQGHYGLGQGPHGCLPCTCNPLGTLPGGNPCDSDTGRCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCRSCDCDQGGAVNNNCNPQTGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNMPEGAYLEFIINN
IPESMDYDILIRYEPQLPDQWEQVNIRVQRPVYNPPNYSSHCGNSIQGGDEQSISLPPGS
RHVLLVRPVCFEQGLNYTIHLSLPLYSSVSDVQSPYTLVDSLVLIPRVRELDMFHGVDGD
GAWDTFQRYRCLESSQSVVKSPLTDICNNYIFSVSALLHKGAIACQCDPQGSLSALCEPS
GGQCRCRSNVVGRNCDHCAPATFLFSPNGCRSCECDARGSIDAFCHEATGQCECVPGATG
RQCSHCLPGFWGFPQCRACQCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDGYHGNPVL
GSGGNCRPCMCPDGPRSGRQFSDSCYLMANSNQLVCVCSPGYKGARCDECAPGYFGNPLV
PGGRCMPCQCSSNIDMHDPGSCDARTGACLKCLYHTEGYGCQHCKQGYYGNAATQSCRKC
MCYSAGTSPQSCSSLDECQCNQHSGQCPCQPNVVGQNCDRCAVDTWNIASRTGCQSCNCH
PVHSSGSSCDEVTGQCLCKPGFGGKTCRECRELFWGDPEVKCHACDCDSRGISSNQCHRA
TGQCACVKGVSGQRCDECARGYMGEFPTCKPCHQCFAVWDTVVGELTNQTQRLEAQVTQL
QTSGVTAPYKELVASLERNAKAVREIVENNPAAVKLEKIQDLMHQITGVMSYLNGKLNTT
EETLNILHSDANATDANLDALTAEANQLELSVQDLRQQVHKAKNANIQGAMDTIAAAHMQ
STTAELRANTSTSHPGNTVEGSATVRKATEDKLTGAQKEFDRKHQRNSQKLDKLSTELDK
FDLSPLSKKTCGGAAEGDGCPGSPCGGLGCVGKDGVLHCGGEGCGGLVTTSQTAHKSAKE
LDQEIVTAMQEVDKLSRMVWEANSRANEAKVNAMDVLIKSNQSKQRVEQNNEQLRNLIKE
IRDLLTNEKADVSVIEAVANEVLALEMPTSTEKLKELTEEIRERVRTLTSVETILSQSAD
DIQAAETLLKQAKAASEEASNMKETADIVKAALVETERAQSIAMDAIQLAQNNTKGTLEL
LISVESETAMSELKLGNTTGRLVQLEMEVGLLRQNNFDVDRLAKTADMTTDQARLNAEEA
QQEFDTEVRDKMVEVEDLVEDKGDSVLQARRRADMLQKEAKELLAQSRIKLQELGELESS
YEANQLILEAKAAELAELEQTARRLLEEISYKVTLYSTCL
NT seq 5343 nt   +upstreamnt  +downstreamnt
atgtcactcataatccactttgtaacagctttggcactgtggtggcccgccagggcccag
ctgccagagtttggggatgtttgcaccaaagggagctgctaccccgccacaggtgacctg
ctgatcggccgcgcgcacaggctcagcgcctcctccacctgcggactcaagcagccggag
cgctactgcatcgtcggacatctggaggacgagaagaaatgttttgtgtgcgactcgagg
aagccgttcaacgaggacaccaaccaagacagccacaccattgagaacctggtcaccacg
ttcgcccacaaccgcctcaagacctggtggcagtcggagaacggtgtggagaatgtgacc
atccagctggacctggaggccgagtttcacttcacacaccttattatgaccttcaggacg
tttaggccagctgccatgttgatcgagcggtccatggactttgggaaaacatggcaggtt
tatcgttactttgcctacgactgcgagtcatccttccccggtgtgccctccgggccaatg
gccagagtggacgagatagtctgtgactcccattactcagacatcgaaccatccacagag
ggagaagtgatatttcgggtgctggaccccgtctttcagattgaggacccctacagcctg
aggatacagaacatgctgaagatcactaatctccgggtgaagttcaccaagctccacaca
ttgggcgacaacctgctcgactcccgcgacgatgtgatagagaagtactactactccctc
tatgacatggtcgtccgtggcaactgcttctgctacggtcatgcctcggagtgcgccccc
atggatggaacaacatttgatgctgagggcatggtccatggccgctgtgcatgcaatcac
aacacagagggattaaactgtgagcgctgtcaggacttttaccatgacatgccttggaga
cctgcagaggggcaaaacacccacgcctgcaagaagtgcgagtgtaaccatcactccaca
tcgtgtcacttcgacctggccgtgtacatgacaaccggcaacattagcgggggcgtgtgc
gacgactgtcaacacaacacgatgggccgacagtgtgagcagtgtgcacccttctacttc
cagcacccaaaccgagacctcagggaccctaacgtctgtgaaccgtgtaactgtgacccc
tccgggtctctgcagggcggactgtgtgactcgcacaatgatgtagccgccgggatgatc
tcaggccagtgtcggtgcaaagccaatgtggagggcgaacgctgcgacaactgcaaacag
ggacactacggactgggacagggacctcacggctgcctgccgtgtacctgtaacccgctg
ggaactctgcctggaggaaacccctgtgattcagacacagggaggtgcttctgcaaacgc
ctcgtcgacggacataactgcgatcagtgtctgccgcagcactggggtctatccaatgac
atggacggctgcagatcatgtgactgcgaccagggtggggctgtaaacaataactgtaat
cctcaaacaggacagtgtgtgtgcagggagcacatgtttggacgacgctgcgatcaagtc
gagtctggcttctactttatcgctctggatcactacacctacgaggcagaagatgccaag
catgggcctggtgtgacggtggtaccgaggccttaccctctggatcgcagtccgacatgg
accggtatgggttttgttaatatgccagaaggagcttacttagagttcatcattaacaac
atcccagagtccatggactatgacatccttattcgctatgagccccagctgccagaccag
tgggagcaggtgaacatccgagtgcagcgccccgtctataaccctccaaactactcctct
cactgcggtaactccatccagggcggagacgagcagtccatctctcttccccctggatcc
agacacgtgttgctggtgagaccggtgtgttttgagcaaggactgaactacacgattcat
ctctctctgcctctctactcttcagtcagtgacgtccagagcccgtacacactcgtcgac
tccttggtgctgataccccgggtcagggagctggacatgttccatggggtcgatggtgat
ggagcgtgggatacgttccagcgctaccggtgtctggagagcagccagagcgtcgtcaaa
agccccttgaccgacatctgtaacaactatatcttcagcgtctctgctctgctccacaaa
ggagccattgcatgccagtgtgaccctcagggttcactaagtgctttgtgtgagcccagt
ggaggtcagtgccggtgtcgatccaatgtggtcggcaggaactgcgaccactgtgccccg
gctacgtttctcttcagccccaacggctgcaggtcttgcgagtgtgacgctcggggttcg
atcgacgccttctgccacgaggcgacgggccagtgtgagtgtgtccctggggccacaggg
cgccagtgttcccactgcctgcccggcttctggggcttccctcagtgtagagcgtgccag
tgtaacggccacagcgagtactgccaccctcagactggagagtgtcaagggtgcagagac
tttaccactggacaccactgtgagaggtgtttggacggttaccacggcaacccagtgttg
ggttcaggtggcaactgtcgcccctgtatgtgccccgatggaccgcgcagtggacgccag
ttttctgacagctgttaccttatggctaatagtaaccagcttgtgtgtgtgtgcagccct
ggctacaaaggtgccaggtgtgatgagtgtgctcccggttacttcgggaaccctctggtg
cccggtgggcgctgcatgccctgccagtgcagcagcaacatcgatatgcacgacccgggg
tcctgtgacgctcggacaggcgcctgtctcaaatgcctgtaccacactgagggctacggg
tgtcaacactgcaaacagggttactatggcaacgctgctactcagagctgcaggaagtgt
atgtgttactcagcgggcacatcacctcagtcctgttcctcccttgatgagtgtcagtgt
aatcagcacagcggtcagtgtccctgccagccgaacgtggtcggtcagaactgcgaccgc
tgtgccgttgatacgtggaacatcgccagcaggacgggctgccagagctgcaactgccac
cccgtccactcttctggatcctcctgcgatgaggtcacaggacagtgcttgtgcaaaccc
ggttttggtgggaagacctgtcgggagtgcagagaactcttctggggggatccagaggtc
aaatgtcatgcttgtgactgcgattctcggggaatctccagcaatcagtgccatcgtgcg
acaggtcagtgcgcctgtgtgaagggcgtgtccggccaacgctgtgacgagtgcgccaga
ggctacatgggtgagttccccacctgtaaaccctgccaccagtgctttgctgtgtgggac
accgtggtgggcgagctgaccaatcaaacccaacgtctggaggcccaagtgacacagctg
cagaccagcggggtgacagcgccatataaagaactggtcgccagcctggagagaaacgcc
aaagctgtcagagaaatagtagagaataaccctgctgcagtgaagctggagaagattcag
gacctgatgcaccagattacgggtgtgatgtcctacctaaacggaaagctgaacacgaca
gaggagaccttgaacattctccacagtgacgccaatgccaccgatgcaaacttggacgcg
ctgactgccgaggccaaccagctggagctgagtgtccaggacctgagacagcaggttcac
aaagcaaagaacgccaacatccagggtgccatggacactattgcagctgcacacatgcag
tctacgacagcagagctccgcgccaacacctccaccagtcatcccggaaacacggtggag
gggtcagccacagtacggaaagccacggaggacaaactgaccggcgctcagaaggaattt
gaccgcaagcaccaaagaaactcacagaagctggacaaactgtccactgagctggataaa
tttgacctgtcaccacttagcaagaagacatgtggtggtgcagctgaaggggacggctgc
cccggctccccctgtggtggtttgggttgcgtcggcaaggatggagtccttcactgtggc
ggagaaggatgcggaggcctcgtcacaacctcccaaactgctcacaaatcagccaaagag
ttggaccaggagatcgtcacagcgatgcaggaggtggacaagctctccaggatggtgtgg
gaagccaacagccgcgcaaacgaagccaaggtgaatgctatggacgtgctgatcaaatcc
aaccagagcaaacaaagagtggagcagaacaacgagcagctccgcaacctcatcaaagag
atacgagacctgctcaccaatgagaaggcagatgtgtcagtgatcgaggctgtggccaac
gaggtgttggctctggagatgccgacctcgacagaaaagctgaaggagctgacggaggag
atcagggagagggtgcgaactctgaccagtgtggagaccatactcagtcagagcgctgac
gacatccaggctgcagagacgctcttgaaacaggccaaggctgccagtgaagaggcgtct
aacatgaaggagacagcagacatagtgaaggcagccctggttgagactgagcgtgctcag
agtatcgccatggacgccatccaactggcccagaacaacacaaaggggactctggaactg
ctgatctctgtggagtcggagacggcgatgtcagagctgaagctcggtaacaccacaggt
cgtctggttcagctggaaatggaggtcggcctactgagacagaacaactttgacgtggac
cgcctggcaaagacggcagatatgaccaccgaccaggccagactgaacgccgaggaggcc
cagcaggagtttgacaccgaggtgagggacaaaatggttgaggtggaggacctggtggag
gacaaaggggactcggtgctgcaggcgaggagaagagcggacatgctgcagaaggaggcc
aaagagctgctcgcccagagcagaatcaagctgcaggaactgggagagttggagagttcc
tacgaggccaaccagttaatcttggaggcaaaagctgcagagctggccgagttggagcaa
actgcccgtaggctcctagaggaaatcagctacaaagtgacgctgtacagcacctgtctg
tga

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