Etheostoma cragini (Arkansas darter): 117939017
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Entry
117939017 CDS
T07493
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ecra03012
]
117939017 (dhx57)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117939017 (dhx57)
Translation factors [BR:
ecra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117939017 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
RWD
zf-CCCH_4
HA2_N
zf-CCCH
AAA_22
zf_CCCH_4
Torus
nSTAND3
NPHP3_N
AAA_19
NB-ARC
AAA_14
Dpp_8_9_N
ResIII
Viral_helicase1
AAA_16
zf-CCCH_2
GIT_CC
Motif
Other DBs
NCBI-GeneID:
117939017
NCBI-ProteinID:
XP_034719947
LinkDB
All DBs
Position
23:complement(11686346..11696374)
Genome browser
AA seq
1333 aa
AA seq
DB search
MSGDSIRPEMSTMPLQRIFMTNENQEQLKELLRNLQNQDFDEPYDVSGSDYSGGEEDEEE
FDELDHRDEGQFWATNDEPVERAESPAYETESDNDRPTPEPVISLFAIGKLCRYGFDRER
SKQALKSVGGEFGATLEQLLHQVFRERYGQKAISPDGLEGVPMDECLSQRQEEALALTAI
YGERFGERIANTVWTVTLDLSFLSDMAAKNGRQVGSRGGGGAVNIRDVCRFYLKGQGCRF
GDKCKFKHHLPTKVRSGAGSPDLEGPSQPGFSSYSSPEYELEVRFPKGNRYPFQAPIVAF
STNDESFGAAGRISLTERLFGEALAAAKSNEPVVYTLITLCEDKSTVKELLAVSHHKYST
PPPVLAPPPPSLAEAKSVRNNASEECRSSSTNSSNHTISRRAAPSTNQRPVDLKETEEAE
ELDEREDDDESESIPVETESYVNLRKRMVTKHNLKIDNLLKENGKLCREFKKKQSSGRFR
SMLEQRKKLPAWQERENILDLLDQCQVLVVSGMTGCGKTTQIPQFILDASLNGPAEQVVN
IICTQPRRISAISVAQRVAQERAECLGNSVGYQIRLKSVRTSATRLLYCTMGVLLRRLEG
EADLKGITHVIVDEVHERTEESDFLLLVLKDLIMQRPDLKIILMSATLNAKLFSEYFYDC
PTVHIPGRTFPVDQFFLEDAIDRTRYVIEDGSPYMRSGKQNLSSTSGRGREQRDMVDDLG
DDMWNFMSLCKKDFVKDSIPDQQLSLQDLTVRYKDTKKSVLKTIAAMDLDKINMDLVETL
LEWIVDGKHNYPPGAVLVFLPGLAEIKMLYEQLKSNRMFNNRGANRCEVYPLHSSLSNEE
QQAVFSRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDATKSMESLEDSWVS
RANALQRKGRAGRVASGVCFHLFTSHCFQHQLAEQQLPEIQRVPLEQLCLRIKILDVFAD
RMLDSVFSRLIEPPAMGSLDAAKKRLRDLGALTADEKLTPLGYHLACLPVDVRIGKLMLF
GAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFALASSDHLALLQAYKGWCCA
AKNGHQAGFRYCRENFLSWRGLQEIASLKRQFAELLSDIGFIKEGLRARVIERMSSKGTD
GVVEATGPEANLNSENIRLMSAMLCAALYPNVVQVRAPQGNYKMTSKGAMKMQPKANELR
FMTKDDGCVHVHPSSVNYTVRHYTSPYLVYHEKVKTSRIFIRDCSMVSVYPLVLFGGGQV
NMELHKGEFIISLDDGWIRFAAASHQVAELVKELRWELDQLLEDKIRSPSMDLCTCPRGS
RIIHMIVQLISTQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgacagcatcaggccggagatgagcaccatgcccttgcagaggatcttcatg
actaatgagaaccaagaacaactcaaggagctgctgcgtaatctgcagaaccaggacttt
gatgagccatatgatgtatctggttccgattattcgggaggagaagaggatgaggaggaa
tttgatgagttggaccaccgagacgaaggccagttttgggccactaatgatgagcctgta
gagagggcagagagcccagcgtatgagacagagtctgataatgaccggcccacccctgaa
cctgtcatatccctgtttgctataggaaaactctgcaggtatgggtttgacagggagcgc
agcaagcaagcattgaagtctgttggaggggaattcggggccactttggaacagctcctg
caccaggttttcagggagcgctatggccagaaagccatttctcctgatggcctggaaggg
gtgcctatggatgagtgtttgagccagaggcaggaggaagctctggctctaactgctatt
tatggtgagcgcttcggtgagcgcattgctaatacagtctggacagtaaccctagacctc
tcattcctctcagacatggctgccaagaatggtaggcaagtcgggagtcgaggtggcgga
ggagcagttaacatccgagatgtctgccgattctacttgaaaggacagggctgcaggttt
ggggacaaatgcaagtttaagcaccatctccccactaaagtgagatctggggctggttcc
ccagacctggaaggcccaagccagcctggctttagcagctattcttcccctgagtatgag
ctcgaggtccgtttccccaaaggaaaccgttacccatttcaggcaccaatagtcgccttc
agcaccaacgacgagtctttcggggcggcagggaggatcagcttgactgaaagattgttt
ggagaagcattggccgcagcaaagagcaacgagcctgttgtttacaccctaatcacctta
tgtgaagacaaatctaccgtgaaggaactgctggctgttagtcatcacaaatacagcacg
ccaccgcctgttttagcgcctcctccaccctctcttgctgaggctaagagtgtgaggaac
aatgcttctgaggaatgcaggagtagtagtaccaatagtagtaaccataccatcagcaga
agggctgctccatctaccaaccagagacccgtagatctgaaagaaaccgaagaggcagag
gagctggatgagagggaggacgacgatgagagtgagtctattccagttgagaccgaaagt
tatgtcaatctaaggaagagaatggtcactaaacacaacctgaagatagacaacctactg
aaagaaaatggcaagctgtgtcgagagtttaagaagaaacagtcatccgggcgtttcagg
tccatgttagagcagaggaagaaactgccggcttggcaagaaagagaaaacatcctcgac
ctgttagaccagtgccaggtgctggttgtcagcgggatgacagggtgcggtaagaccacg
cagatccctcagttcattctggacgcctcgttaaatggcccagcggagcaggtggtcaac
atcatctgtacccagccacgccgcatctctgccatttctgtggcccagagagtggcacag
gagcgggcagagtgtctgggcaactccgtgggctaccagatccgtctgaagagtgttagg
acgtcggccaccagactcctctactgcaccatgggtgtgttacttaggagactggagggc
gaggcagacctcaaaggcatcacgcacgtcattgtggatgaggttcacgagcgaacggag
gagagtgacttcctgctgttagtgttaaaagacctgattatgcagaggccagacctgaag
atcattctaatgagtgccacacttaatgccaaactcttctctgagtatttctacgactgt
cccactgtccacataccaggtcgtacttttcccgttgaccagttttttcttgaagatgcc
atcgacagaacccggtatgtcattgaggatggaagcccttacatgcgctcagggaaacag
aatttgtcttccacaagtggacgagggagagagcaaagggacatggtggacgacttgggt
gatgacatgtggaacttcatgtctctctgcaagaaggactttgtcaaagactctattcca
gaccagcagctcagcctgcaggatctcacagtcagatacaaagatactaagaagtctgtg
ctgaagactattgctgcaatggacctggacaagatcaacatggacctggtggagaccctg
ctggaatggattgtagatggaaaacataactaccctccaggtgcggtgcttgtgtttctg
ccaggcctggctgagatcaagatgctctacgagcagctcaagtccaacagaatgttcaac
aaccggggagcaaacagatgtgaggtgtacccactccactcatccttgtccaatgaggag
caacaggcagttttcagccggcccccagagggtgtcacaaagattatcatctccaccaac
attgctgagacctctgtaactattgacgacgtggtttatgtcatcgactctggcaagatg
aaggagaaaaggtacgatgcgaccaaaagcatggagagcctggaggactcgtgggtttct
cgggccaacgcactgcagaggaagggtcgagcaggtcgcgttgcctcgggggtctgcttc
cacctcttcaccagccactgcttccaacaccagctggcggaacaacagctgccggagatc
caaagagtgcctctcgagcagctctgcctccgaatcaagatcctggatgtgtttgcagat
cggatgcttgattctgtgttctctcggctcatcgagcccccggctatgggaagcttggat
gcggccaagaagcgcctgcgggaccttggagctctaaccgcggatgagaaactgacaccg
ctgggctaccacctggcctgcctgcccgtcgacgtgcgcatcgggaaactcatgctgttt
ggtgccatctttcgctgccttgacccagcactcaccatcgctgccagtctggccttcaag
tcaccatttgtgtctccatgggataagcgggaagaagccaatgagaagaagctggccttt
gccctggccagtagtgaccatctagctttgttacaggcatacaagggatggtgctgtgct
gcaaagaatggccaccaggccggctttcgttactgcagggagaacttcctgtcttggcgg
ggcttacaggagatcgccagtctaaagaggcagtttgctgagctgctgtctgacattggc
ttcatcaaagagggactgagggccagggttatagagcgcatgtcatccaaaggcactgat
ggtgttgtggaggccaccggccccgaggctaacttgaactccgaaaacatccggctgatg
tccgccatgctttgtgctgccctctatcccaatgtggtccaggtacgagctcctcagggg
aattacaagatgaccagcaaaggagcgatgaagatgcagcccaaagccaacgagctccgc
ttcatgaccaaggacgatggctgcgtccacgtgcacccctcctctgtcaactacacagtt
cgccactacactagcccctacctagtttaccacgagaaggtgaagacaagccgcatcttc
atcagggactgtagcatggtgtccgtctacccgctggtgctgtttggaggcgggcaggtc
aacatggagctgcacaaaggagagtttatcatctccctcgacgatggatggatccgattt
gctgccgcttctcatcaggtggcggagctggtgaaagagctgcgctgggagctggaccag
ctgttggaggacaaaatcaggagtccaagcatggacctgtgcacctgtccccgtggctcc
cgcatcatccacatgatagtccaactcatttctacacagtag
DBGET
integrated database retrieval system
