Etheostoma cragini (Arkansas darter): 117939062
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Entry
117939062 CDS
T07493
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-associated NEDD8-dissociated protein 1-like
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117939062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117939062
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
117939062
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117939062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_CAND1
TIP120
HEAT_EF3_N
HEAT_GCN1
HEAT_EZ
HEAT
CandA_N
HEAT_2
TOR1L1_N
HEAT_MROH2B_C
Cnd1
HEAT_GCN1_C_2
mTOR_dom
Adaptin_N
VHS
ARM_TBCD_2nd
MMS19_C
Proteasom_PSMB
WHD_MalT
Motif
Other DBs
NCBI-GeneID:
117939062
NCBI-ProteinID:
XP_034719997
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All DBs
Position
23:818727..851232
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AA seq
1103 aa
AA seq
DB search
MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVRMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAASVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLCRQGGLLVNFHPSILSCL
LPQLTSPRLAVRKRTIMALGHLVMSCGNLVFIDLIEHLLTELGRNDNMSTTRTYIQCTAA
ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRXYTHTLVIFIVLLGV
HGVVVLVFIVEVVVGVVGQVAQAERDYRGNVGECPGSVDVHHVELDVSAQRRQEGAALVE
RHRPTVKERERGSEQRSGRVDDYVALPGTTTGLVREGGRPVPCRAGLGLRKRPADRQTGA
PVMIMLILDTDRQAKGQHGGCLSVRLHARKDPCGSSSRFVSGSSSSQRDLALELAGYTLT
THIPVLIPGIIFSLNDKSSSSNLKIDALACLHVIMVTHPAHAFHAHVPALVPPVVACVGD
PFYKITSEALLVTQQLVKVIRPLDNLSESSDSFDPSPYISDLFTCTIKRLKAADIDQEVK
ERAISCMGQIICNLGDRLPAELPGTLLIFLERLKNEITRLTTVKALTLIAGSPLKIDLRP
VLPDAVPILASFLRKNQRALKLCTLAALDILLRNYSSAVTPVMVDAVLAELPPLISESDM
HVSQMALSFLSTLAVTHPSSLGQLSGGNILQQLIALVRSPLLQGGALSAMLDFYQALVAT
ETPGLGYMDLLRMLTGPVYSQSASLPHKQAYCSIAKCVAALTRACPDEGPAVVGQFIQDV
KNSRSTDSIRLLALLSLGEVGHHVDLSSQPELKTVILDAFSSSSEEVTPVCLTRKCLLEA
KTFTLKAFRQEYNKSPDALCVCVRISLCVRISLCVCVCVRAGSSYARSSVVTAVKFTISD
QPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRELLDSVLPQLYNE
TKVRKELIREVEMGPFKHTVDDGLDLRKAAFECMYTLLDSCLDRLDIFTFLNHVEDGLKD
HYDIKVRVLPDLVRQLRNQACEN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctcgtaccacatctccaacctgctggagaaaatgacttccagcgacaag
gacttcaggtttatggccaccaacgacctgatgacggagctgcagaaagattcaatcaaa
ctggacgacgacagcgagaggaaggtggtgaggatgattctcaaactgctggaagacaag
aacggagaagttcagaatctggccgtcaaatgcctggggcccctggtgagcaaggtaaag
gagtaccaggtggagacgatcgtggacactctgtgcaccaacatgctgtcggacaaagaa
cagctccgagacatttcctccatcggactcaagaccgtgatcggagagttaccgcccgcc
tccagtggctctgctctcgctgccagcgtctgtaagaagataacgggtcgcctgacgagc
gccatcgccaaacaggaagacgtgtctgtccagctggaggcgctcgacatcatggctgac
atgctctgcagacagggaggcctgctggtgaacttccatccctccatcctgagctgtctt
ctcccccagctcacctccccccgattggctgtcaggaagaggaccatcatggctctgggc
cacctggtcatgtcctgtgggaacctggtcttcatcgatctgatcgagcacctcctgacg
gagctgggccgcaacgacaacatgtcgaccaccaggacctacatccagtgcacggccgcc
atcagcagacaggctggacaccggatcggagagtatctggagaagataattcctctggta
gtgaagttttgtaacgttgacgatgacgagctccgagagtactgcatccaggcctttgag
tccttcgttaggaggtaatacacacataccttggtaatcttcatcgttctgctcggcgtc
catggcgttgtcgtcctcgtcttcatcgtcgaagttgtagttggggtcgtaggtcaggta
gcgcaggcagagcgagattaccgtggaaacgtgggggaatgtccaggaagcgtcgacgtt
caccacgtcgagcttgacgtcagcgcgcagcggcggcaggagggagcggctctggtagag
cgacatagaccgacagtgaaggagagagagagagggagcgagcagcggagcggacgggtc
gatgattatgtagctttacccgggacgaccacgggactagtgcgggaggggggcaggccg
gtgccgtgccgagctgggctgggtttgcggaagcgaccggcggacagacagacaggagct
ccggtaatgataatgttgatattggacacagacagacaggcgaaaggacaacatggcggc
tgtttgtctgtccgtcttcacgcccgcaaagacccgtgcggttccagctcgcggttcgtc
tccggttcctccagcagtcagcgggacctggcgctagagctggccggctacaccctgacg
acccacatcccagtactaataccaggcatcatcttctctctgaacgataagtcgagtagc
tccaacctaaaaatcgacgccctggcgtgcctgcacgtcatcatggtcacgcacccggcg
cacgccttccacgcccacgtccccgccctcgtcccgcccgtggtggcgtgcgtgggagac
cccttctacaagatcacgtccgaggctctgctcgtcactcagcagctggtcaaggtgatc
cggcctctggacaacctatcggagagctccgacagcttcgacccctccccttacatcagc
gacctgttcacctgcacgatcaaacgcctgaaagccgccgacatcgaccaggaagtcaaa
gaacgagccatctcctgcatgggacagatcatctgtaacctaggagaccggctgcccgct
gaacttcctggaacgctgttgatctttttggagcgcctcaagaacgagatcaccaggctg
acgacggtgaaagctctgacgctgatcgccggctcgccgctgaagatcgatctgaggccg
gttctgcccgacgccgttcccatcctcgcctccttcctccgcaagaaccagcgagccctg
aagctctgtaccctggctgctctggacatcctgctccgaaactacagctctgcggtgacc
cccgtcatggtggacgcggtgctggccgagctccctcctctcatctcggagagcgacatg
cacgtgtctcagatggcgctgagcttcctgtccacgctggcggtgacccacccgtcctcg
ctgggtcagctgagcggaggaaacatcctccagcagctcattgcgctggtccgatccccg
ctgctgcagggcggggcgctctccgccatgctcgacttctaccaggccttggtggcgaca
gagacccccggtctgggctacatggacctgctgaggatgctgaccggtccggtctactcc
cagagtgcctctctgccccacaaacaggcgtactgctccatcgccaagtgtgtggcggct
ctgacccgggcctgtcccgacgagggacccgctgtggtcggacagttcatccaggatgtg
aagaacagccgctccacagactccatcaggctgctcgctctgctctcattgggcgaggtg
ggacaccatgtggacctgagcagccaaccagagctcaagacagtcatcctggacgctttc
tcctcatccagtgaagaggtaacgcccgtctgtctgaccaggaagtgccttttagaggcc
aagactttcacattaaaagcttttagacaggagtataacaagagtccagatgctctatgt
gtgtgtgtgcgcatttctttgtgtgtgcgcatttctttgtgtgtgtgtgtgtgtgtgcgt
gcaggttcgtcgtacgccaggagctccgtggtaacggcggtaaagtttaccatctccgat
caaccgcagcccatcgacccgctgctgaagaactgcataggtgatttcctgaagacgctg
gaggacccggacctgaacgtgcggcgcgttgccttggtaacgtttaactctgccgcccac
aacaagcccagtctgatccgagagctgctggactccgttttaccacaactctacaacgag
accaaagtcaggaaggagctgatcagagaggtggagatgggtccgttcaaacacacggtg
gacgatggtctggacctgaggaaggctgcgttcgagtgcatgtacactctgctggacagc
tgcctggaccggctcgacatcttcaccttcctcaaccacgtggaggacggcctcaaggac
cactacgacatcaaggtccgggtgttgccagatctcgtgagacaactacgcaaccaggcc
tgtgaaaactag
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