Etheostoma cragini (Arkansas darter): 117939136
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Entry
117939136 CDS
T07493
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117939136 (ddx4)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117939136 (ddx4)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117939136 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117939136
NCBI-ProteinID:
XP_034720050
LinkDB
All DBs
Position
24:10290738..10313665
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AA seq
648 aa
AA seq
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MDEWDEGETSTTTSTIALTSQTSSEGTQGDSWNTGIGDFGRGRGGRGRRGGFKSSFSSDG
DENGNDGGGYNNTGGDRGGFRGRGRGRGFGRTDRSEFNGDGDEERENGFRGGSRGGRGSR
GGGFRQGNDQGAKGGFGGGYRGKDEEIFSYGGDNDPEKKDAVDGDRPKVTYVPPTLPDDE
DSIFSHYESGINFDKYDDIMVDVSGSNPPQAIMTFDEAALCESLRKNVNKSGYVKPTPVQ
KHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFSELQEPEAIIVAPTR
ELINQIYLEARKFAFGTCVRPVVVYGGVSTGHQIRDILRGCNVLCGTPGRLLDMIGRGKV
GLSKLRYLVLDEADRMLDMGFEPDMRRLVGFPEMPSKENRQTLMFSATYPEDIQRMAADF
LKTDYLFLAVGVVGGACSDVEQTFIQVTKFSKREQLLDFLKTTGTERTMVFVETKRQADF
IATYLCQEKVLTTSIHGDREQREREQALADFRSGKCPVLVATSVAARGLDIQDVQHVVNF
DLPNNIDEYVHRIGRTGRCGNTGKAVSFYDPEADGQLARSLVTILSKAQQEVPSWLEESA
FSGPGATGFNPSRKGFASTDSRMGGSFQDNGTRSQPAAQTAADDEEWE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggatgaaggggaaacgtctactactactagtacaattgcactgaccagc
caaacctcaagtgaaggcacacaaggagactcctggaacactggcattggtgattttgga
aggggtcgtggtggcagaggcagacgaggaggatttaaaagctcattttcctcagatggg
gatgagaatgggaatgacgggggtggctataacaatacaggaggagatagaggtggtttc
agaggcagagggcgtggcagaggatttggcaggacagatcgcagtgaattcaatggagat
ggtgatgaagagcgtgaaaatgggtttagaggaggaagcagaggaggaagaggcagcaga
ggaggtggtttcagacaaggtaatgaccagggtgccaaaggaggctttggaggaggctac
cgcgggaaagatgaagagatcttctcttatgggggtgataatgatccagaaaagaaggat
gcagtagatggtgacaggccgaaggtcacgtatgttcccccaacccttcctgacgatgag
gactccattttttcccactatgagtcaggcattaactttgacaagtatgatgacatcatg
gtggatgtaagtggaagcaacccaccgcaggctatcatgacttttgatgaggcagcattg
tgcgagtccctaagaaaaaatgtcaacaagtctggttatgtgaagccgacccctgtgcag
aagcacggcatcccaatcatctctgccggtagagatctcatggcctgtgcccagactgga
tctggtaaaacggctgcattcctgctccctattctgcagcagctgatggcagatggtgta
gcagccagcagctttagtgagctgcaggagcctgaagccatcattgtggccccaaccagg
gagctcatcaaccagatttatctggaggccaggaagtttgcttttgggacatgtgtacgc
ccggtagtggtttatggtggagtcagcactggacaccaaataagagacatcttaaggggg
tgcaatgtgctgtgcggaacaccagggagactgttggatatgattggaagaggaaaggtt
gggttgagtaagctgcggtacttggtgctcgatgaggctgaccggatgttggatatgggt
tttgagcctgacatgcgccgcttggtgggtttccctgaaatgccttccaaagagaaccgc
cagactctgatgttcagtgccacctacccagaagacatccagagaatggctgctgacttc
ctcaagacagactatttgttcttggctgtgggtgtggttggtggagcctgcagtgatgtg
gagcagacatttatccaagtcaccaagttctccaagagagaacagctccttgactttctt
aagaccactggaacggagcgcaccatggtgtttgtggagaccaagagacaagcagatttc
attgccacttacctgtgccaggagaaggttttgacaaccagcattcatggtgatcgtgag
caacgggagcgagagcaggctctggcagacttccgctctggcaaatgtccagtcttggta
gcaacttcagttgctgctcgcggtctggatattcaagatgtacagcatgtggtgaacttt
gatctccctaacaacattgatgaatatgtccaccgtattgggagaactggccgctgtggt
aacactgggaaggcggtgtctttctatgaccccgaagctgacggccaattggcccgctcc
ctcgtcacaattttgtccaaggcccagcaggaagtgccctcatggttggaggagtcggcg
tttagcggccctggagccacaggcttcaacccctccaggaagggctttgcctcaacggac
tccaggatgggaggatctttccaagacaacggcacgaggagccagcccgctgctcagact
gcagctgacgatgaagaatgggaatag
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