Etheostoma cragini (Arkansas darter): 117939190
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Entry
117939190 CDS
T07493
Symbol
trim25l
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117939190 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117939190 (trim25l)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117939190 (trim25l)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117939190 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
DUF948
Exonuc_VII_L
U-box
zf-RING_6
Hydantoinase_B
HisKA
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
117939190
NCBI-ProteinID:
XP_034720139
LinkDB
All DBs
Position
24:3302449..3308659
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AA seq
828 aa
AA seq
DB search
MSAKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIKDYWSKDDPKGVYSCPQCRQSFS
PKPSLSRNTMLAEAVEQLRKGARTADVRESMRSARGVAAASRSRSKGKLSSSAVPCDMCK
GEERAAVKSCLMCMSSFCETHLKPHQTKKALNQHELIAPTANLAEKICTQHKYLQEFFCR
QCKVFVCWLCTSNQHKGHECVSTKAERLEKQKVMSEMYAENQQKLKDREQELKDMKKMMD
VTKRSLDGMHEDTEQVLSELQHSVERLQELLEEVLHQASLEKMGHAQEVANSLQAEIKEL
QKRDMEMKDLALCEDHIYYLEKYESMCYPLETGDLPAVLVNLDASFEPAREAILDLRDRV
EDLCNQELSKITKQVNDTALFTLRDSNRSAGQKGGIFKLFSGLSSRNTNSRSPATPPSIS
AGARSADRRGLGIGLKSQDVRSRDTPRVDRGNTNSPRLRNRQRGEERETVRETNSRPSPS
PTPNRRESPSLWSRSSQSQAVPAAAPTPTQMPATPTPAQAPTPAPVQAPTPAPTPAPAST
GGSSFSRMASISSLFRSHRRGTKQATIASPDNTLSPGGNPRGMAALPETPTEINPGLFLD
SPTPGTMDNAPAFPALRELNIDSIQAPEPRTREEFLQYSVTLTLDSNTAHRRLALSDGNT
KATLQVAAQPYPDNPQRFDGWTQVMCQSPLYAQRCYWEVEWRGRGSSIGVVYGALHRKGS
DARSGLGYNAQSWTLELSDTCCSAMHDNEKKDIPVTYSPRLGIYLDLSTGTLAFYSVAES
MTHLHTFRANFTQPLYAAFGVGSGVGVGLDFALGQFSSSSDSIKICPM
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaaactgtggacagaggagcagtttaactgccctgtgtgcctggatctccca
aatgatccagtcaccatcccatgtggtcacagctactgcatggcctgcattaaggactac
tggagcaaggacgaccccaagggggtgtacagctgcccccaatgccgccagagcttcagc
cccaagccctccctgtccaggaacaccatgctggcggaggctgtggagcagctccgcaaa
ggtgcccgcacagctgacgtccgtgaatccatgcgaagcgcccgaggggtcgccgccgca
tccagatccagatccaaagggaagctgtcctcctcagcagtgccgtgcgacatgtgcaaa
ggagaagaacgagcggcggtcaagagctgcctaatgtgcatgagctcattctgcgagacg
cacttgaagccccaccagaccaagaaggccctgaatcagcatgagctgatcgcacccacg
gccaatctggctgagaagatctgcacccagcacaagtacctgcaggagttcttctgtcgc
cagtgtaaggtgttcgtttgctggctgtgcaccagcaaccaacacaaaggccacgagtgt
gtgtccaccaaggctgagcgcttggagaaacagaaagttatgtccgagatgtatgcagag
aatcagcaaaaactgaaagaccgagagcaggagctgaaagacatgaagaagatgatggat
gtgacaaagcgttctttagacgggatgcatgaagacacggagcaggtgctgtcggagctg
cagcactcggtggagcgcctgcaggagctgctggaggaggtgctgcatcaggccagcctg
gagaagatgggacatgctcaggaggtcgccaacagcctgcaggctgagattaaggagctg
cagaagagggacatggagatgaaggacctagcgctctgtgaggaccacatctattacttg
gagaaatacgagtccatgtgctatccgttagagacgggggacctgcccgctgtgttggtc
aatctggacgcttcctttgagccagcacgagaagccatcttagacctcagggaccgagtc
gaggacctgtgcaaccaggagctgagcaagatcaccaaacaagtcaatgacacagctctg
ttcactttgcgagactccaaccgcagcgcaggacagaaaggagggatttttaaattgttt
tctggtctgagttctcgcaacacaaacagccgctcaccagctactccacccagtatttca
gcgggagcacggagtgcagacagacgaggacttggtataggcctcaaaagtcaagatgtg
aggagtagagacacaccacgagtagacagaggaaacacaaactcacccagacttcggaac
agacagaggggggaggaaagagagaccgtgagggagaccaactccaggcccagccccagc
cccactcccaaccgcagagagtctccgtctctttggagcaggtccagtcagagccaggct
gtccctgctgcagccccgactccaactcaaatgccagccaccccgactcctgcccaagct
ccaactccagcccctgtccaagctccaactccagctccaactcctgccccagcatcaact
ggagggtctagtttcagtcggatggcatcgatcagcagtctcttccgctcccatcggcgt
ggcaccaaacaggccaccatagcttcccccgataacacactgtcaccaggaggaaaccca
cgggggatggctgctctgcctgaaacaccgacagaaattaaccccggactcttcttggac
tcacccacccccggcaccatggataacgctcctgctttccctgcattgagagaactcaac
atcgacagcatccaggccccagagccgaggaccagagaggagttcctacagtactctgtg
acgttgacccttgactccaacacagcccaccgacggctggctctctccgacggcaacact
aaagccaccctgcaggtggcggcgcagccctaccctgacaatccgcagcgttttgatggc
tggacccaggtgatgtgccagagccccctgtatgcccagcgctgttactgggaggtggag
tggagaggccgaggctcctctataggtgtagtttacggagcattacacaggaagggctca
gacgcccggtcggggctcggttacaacgcccagtcctggaccctggagctgtcggacacc
tgctgctctgccatgcacgacaatgagaagaaggacataccagtcacctactccccccgc
ctgggcatctacctggacctgtccactgggacgctggcgttctacagtgtggcagagagc
atgacacaccttcacaccttccgcgctaacttcacccagccgctctacgctgccttcggg
gtgggcagtggagtcggggttggtctggactttgcccttggccagttcagctccagctct
gacagcattaagatctgtcccatgtga
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