Etheostoma cragini (Arkansas darter): 117939218
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Entry
117939218 CDS
T07493
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117939218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117939218
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117939218
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117939218
NCBI-ProteinID:
XP_034720215
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Position
24:complement(4106105..4128139)
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AA seq
473 aa
AA seq
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MVVMDLNTVTSLNSRRVSRMSVMTRFVLSLLLLCGCQNSLCLSSSEAQKEAAANDNSTVF
TRILDGLLDGYDNRLRPGLGENVTEIQTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERL
CFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGSLLYTMRLTI
SAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTEGEAKPVVVAEDGSRLNQYHLIG
LTSSTENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPAR
TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSW
AWDGKKALEAQPPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRASE
TKMVDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNRVPLVEGVVTST
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggatctaaatacagttacaagtctgaacagtagacgtgtgagtagaatg
tcagtcatgacgaggttcgtcctctccctcctgctcctgtgtggatgccaaaatagtctc
tgcctgtcctcctcagaggctcagaaggaggcggccgccaacgacaacagcacagtgttc
accaggatcctggacgggctcctcgacggttatgacaacaggctccggccggggctagga
gaaaatgtcacagagatccagacgaatatttttgtcaccagctttggcccggtgtctgac
acggagatggaatacaccatagacgtcttcttccgtcagagctggaaagacgagcggctg
tgcttcaaagggcccatggagatgctgccgttgaacaacctgctggccagcaacatctgg
acccccgacaccttctttcttaatggcaagaagtctattgctcataacatgacgacgcct
aacaagctgctgaggctgaaggacgacggcagtttgctttacactatgagactgaccata
tcagcagaatgccccatgcagctggaggatttccccatggatgcacatgcctgccctctc
aagtttggcagctatgcctatccggtgtcagaggtggtctacacttggactgagggagag
gctaagcctgtggtggtggcagaagacggctccagactcaaccagtatcacctcatcggg
ttaacttccagcacagagaacatacacacaagcagaggacagtatacagtgatgatggcc
cacttctacctgaagaggaagattggatattttgtcatccagacatatatgccatgtttc
atgactgtaatcctgtcccaggtgtcattttggctaaacagagaatccgttcctgcaagg
actgtctttggggtgaccactgtgctgaccatgaccaccctcagcatcagcgcaaggaac
tcactccctaaagtggcctacgccacagctatggattggttcattgccgtctgctacgct
ttcgtcttttctgccctcatcgagttcgccacggtgaactacttcaccaagaggagctgg
gcctgggatggcaagaaggctctggaagcacagccccctaagaaacgagaccccatggtg
ctgtccaaaaagcctaacaacgtttgctcggcgggcgtcaactacacccccaacctcacc
aaggacgtgtccatctccacgatctccaacacaacgtcggtgcagctccgagcctcagag
accaagatggtggaccccaagaaaacctacaacagtgtcagcaagattgacaagatgtct
cggatagtgtttcctgtcctctttggaaccttcaacctcgtctactgggccacgtacctt
aacagagtaccgctggtggaaggagtggtgacgtccacataa
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