Etheostoma cragini (Arkansas darter): 117939231
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Entry
117939231 CDS
T07493
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117939231
Pattern recognition receptors [BR:
ecra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117939231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
WHD_NOD2
LRR_1
PRY
LRR_4
SPRY
nSTAND3
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
117939231
NCBI-ProteinID:
XP_034720247
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Position
3:complement(29753376..29892947)
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AA seq
1291 aa
AA seq
DB search
MSQCEDREEGPPPSKTTLWGDHDSQTKAQSIRMQQQKPGPGPSCVSMKSDRSMGRLINFK
DGRAVDGSLQKRPEPGPGPSFVSMKSERSMGHFITFKDGQTLDERVHQESSEGLGGQSDL
QQQTDLDSIFMLLEENIVTFVKNELKKFQKVLCPDYPECLESWREDEEVLEGEDEEQRRR
SREAFLKITLHFLMRMKQEELADRLHSRSLSGVCQRKLKTNQKIKFQCVFEGIAKAGNPT
VLYQMFTEIYIMEGGAAGVNEEHEVRQIETASRKPDRPETIIRCEDIFKAPPGRDEPIRT
VMTKGVAGIGKTVLTQKFTLDWAEGKANQDIQFIFPFTFRELNVLKERKFSLVELVDDFF
SETKEAGISRFEEVQVVFIFDGLDECRLPLDFLNTEILTDVTESTSVGVLLTNLIRGNLL
PSARLWITTRPAAANQIPAEYVDMVTEVRGFTDPQKEDYFSKRYRDKKQASKVISHIKSS
QSLHIMCHIPVFCWITATVLEKVLETREGGQLPKTLTEMYIHFLVVQSKLNVKYHEKSEI
DQHWSPETRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEES
GLYQDKVFCFVHLSVQEFLAALHVHLTFTNSRVNLLAEEQTTSRLSKVFRETLKLKHLHQ
SAVEKALQSPNGHMDLFLRFLLGLSLETNQTLLRGLMTQTASSSKTKKETVKYIKKKISE
NLSAERSINLFHCLNELNDGSLVEEIQQSLSSGRLSTDKLSPAQWSALVFILLSSEEDLD
VFDLKKYSASEEALLRLLPVVKASNKALLKDCNLTERSCEALSSVLSSQSSSLRELDLSN
NKLQDSGVELVSAGLKSPNCRLETLRLSGCTLSERSCEALSSVLSSQSSSLRELDLSNNN
LQDSGVEHLSSGLESPHCRLETLSLSGCNLSERSCVALSSVLSSQSSSLRELDLSNNELQ
DSGVDLVSAGLKSPHCRLETLRLSGCSLSERSCKALSSVLSSQSSSLRELDLSNNDLQDS
GVELMSPGLKSPHCRLETLSVSGCMISEEGCTSLASALSSNPSHLRVLDLSYNHPGDSGV
KQLSALLEDPNCRLDTLRVDHGGPQRLRPGLRKYVCELELDTNTVHRELKLSDNNRKVTH
VAEDQSYPDHPDRFDIWHQLLCRDGLTGRCYWEVERRGRVNISVSYRGIRRKGDSLDCVF
GGNDHSWSLICSNGDGYSVCHNYIRTVLTSCSVSNRVAVYVDVPAGSLSFYKVSSDSLIH
LHTFNTTFTQPLYPGFGFWSDSSVSLCPLQD
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgaggacagagaggagggaccccctccctctaaaaccactctgtggggg
gaccatgacagccagaccaaagctcagagtatcaggatgcagcagcagaaacctggacct
ggacccagctgtgtgtccatgaagagtgaccggtctatgggtcgtcttattaactttaaa
gatggacgagctgttgatggaagtctgcagaaaagacctgaaccaggacctggacccagc
tttgtgtccatgaagagtgaacggtctatgggtcattttattacctttaaagatggacaa
acgctggatgaaagagttcaccaggagagctcagagggcctcggtggtcagtctgacctg
cagcagcaaacagacctggactccatatttatgctgctggaggagaacatcgtcactttt
gtaaagaacgagctgaagaagtttcagaaggttctatgtccagattacccagaatgctta
gagagttggagggaggatgaggaggttttggagggtgaggatgaagagcagaggaggagg
agcagagaagcatttctgaagatcacactgcacttcctgatgagaatgaagcaggaggag
ctggctgaccgtctgcacagcagaagtctttctggagtttgtcagcgtaaactcaagact
aaccagaagataaagttccagtgtgtgtttgaggggattgctaaagcaggaaacccaacc
gttctgtatcagatgttcacagagatctacatcatggagggaggggctgcaggggtcaat
gaagaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaaca
ataatcagatgtgaagacatctttaaagccccacctggaagagatgaaccaatcagaacc
gtgatgacaaagggagtggctggcatcgggaaaacagtcttaacacagaagttcactctg
gactgggctgaaggcaaagccaaccaggacatccagttcatattcccattcaccttcaga
gagctgaatgtgctgaaagagagaaagttcagcttggtagaacttgttgatgacttcttt
agtgaaaccaaagaagcaggaatcagcaggtttgaagaggtccaggttgtcttcatcttt
gacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgat
gttacagagtccacctcagtgggtgtgctgctgacaaacctcatcagggggaatctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctgctgag
tatgttgacatggtgacagaggtcagaggattcactgacccacagaaggaggattatttc
agtaagagatacagagacaagaagcaggccagcaaagtcatctctcatatcaagtcatca
caaagcctccacatcatgtgtcacatcccagtcttctgctggatcactgctacagttctg
gagaaggtgttggagaccagagagggaggacagctgcccaagaccctgactgagatgtac
atccacttcctggtggttcagtccaaactgaacgtaaaatatcatgagaaatctgagata
gatcaacactggagtccagagaccaggaagatgattgagtctctgggaaaactggctttt
gagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcatccgtgtactcaggagtgttcacacagatctttaaagaagagagt
ggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagttcctggct
gctcttcatgtccatctgaccttcaccaactctagagtcaacctgttggcagaagaacaa
acaacctcccggctgtctaaagtcttcagagaaacccttaaactaaaacatctccatcag
agtgctgttgaaaaggccttacagagtccaaatggacacatggacttgttcctccgcttc
cttctgggtctttcactagagaccaatcagactctccttcgagggctgatgacacagaca
gcaagtagctcaaagaccaaaaaggaaacagtcaagtacatcaagaagaagatcagtgag
aatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatggt
tctctagtggaggagatccaacagtccctgagttcaggacgtctctccacagataaactg
tctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctggac
gtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtt
gtcaaagcctccaacaaagctctgctgaaagactgtaacctgacagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaac
aacaaactgcaggattcaggagtggagctggtgtcagctggactgaagagtccaaactgc
agactggaaactctcaggctgagtggctgtacattgtcagagagaagctgtgaagctctc
tcttcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaac
ctgcaggattcaggagtggagcatctgtcctctggattggagagtccacactgcagactg
gaaactctcagcttgagtggctgtaacctgtcagagagaagctgtgtagctctgtcctca
gttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgaactgcag
gattctggagtggacctggtgtcggctggactgaagagtccacactgcagactggagact
ctcaggctgagtggctgtagcctgtcagagagaagctgtaaagctctgtcctcagttctc
agttcccagtcctctagtctgagagagctggacctgagtaacaatgacctgcaggattca
ggagtggagctgatgtctcctggactgaagagtccacactgcagactggagactctcagt
gtctcaggctgtatgatctcagaggaaggctgtacttctctggcctcagctctgagctcc
aatccctcccatctgagagtgctggacctgagctacaatcatccaggagactcaggagtg
aagcagctttctgctttactggaggatccaaactgcagactggacactctcagggtggac
catggtggaccacagagactgagacctggtctgaggaagtatgtctgtgaactggaactg
gacacaaacacagtacacagagaactcaaactgtctgacaacaacaggaaggtgacacat
gtggcggaggatcagtcatatcctgatcatccagacagatttgacatctggcatcagttg
ctgtgtagagatggtctgactggtcgctgttactgggaggtcgagaggagaggaagggtt
aatatatcagttagttacagaggaatcaggaggaaaggagacagtctagactgtgttttt
ggaggtaatgatcattcctggagtctgatctgctctaatggagatggttactctgtctgt
cacaattacataagaacagtcctcacttcctgctctgtctctaacagagtagcagtgtat
gtggacgttcctgctggctctctgtccttctacaaagtctcctctgactcactgatccac
ctccacaccttcaacaccacattcactcagcctctctatcctgggtttgggttctggtct
gattcctcagtgtctctgtgtcctctgcaggactga
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