Etheostoma cragini (Arkansas darter): 117939239
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Entry
117939239 CDS
T07493
Symbol
abcb11b
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117939239 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117939239 (abcb11b)
04147 Exosome [BR:
ecra04147
]
117939239 (abcb11b)
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
117939239 (abcb11b)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117939239 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
AAA_30
AAA_29
AAA_15
AAA_21
AAA_16
Rad17
Zeta_toxin
ACR_tran
Motif
Other DBs
NCBI-GeneID:
117939239
NCBI-ProteinID:
XP_034720284
LinkDB
All DBs
Position
24:complement(2718377..2747819)
Genome browser
AA seq
1360 aa
AA seq
DB search
MPAGSVKLQSIKKLGQNNHSYDFSDEEPAGSYTATATSKDNDKNQENDEQPAIRVGFFQL
FRFATCKDVLMMVVGSVCAVLHGSAQPLMLLVFGLLTDTFIEYDIELNELRDDRKECVNN
TIQWKKNYPEGIGQMTPLNQSGWSLMNNSTWEMFTPLAGRPCGVLDIEYEMTLFAFYYVG
IGAAVFLLGYFQISLWVTAAARQIQLIRKLYFSRVMRMEIGWFDCTSVGELNTRMSDDIN
KINDAIADQVAIFLQRFTTFVCGFCIGFVKGWKLTLVIVAASPMIGVGAGLMALFVAKLT
GRELQAYAKAGAVADEVLTSIRTVAAFGGETKEVQRYDRNLISAQRWGIRKGLIIGFFTG
YMWLIIFLCYGLAFWYGSSLVVTTGEYTPGTLLQVFFGVLIAAMNLGQASSCLEAFAAGR
GAATLIFETIEREPEIDCLSEAGYKLDRVKGDIEFHNVTFYYPSRPDVKILDQLNVAVKS
GETTAFVGPSGAGKSTAIQLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVL
FATTIAENLRYGRPNISMEEIVSAAKEANAYNFIMDLPQQFDTLVGEGGGQMSGGQKQRI
AIARALVRKPRILLLDMATSALDNESEAIVQEALDNVRMGRTTISIAHRLSTIKNADVIV
GFEHGRAVEKGKHNELLERKGVYFTLVTLQSQGDKALNEKARQMADDDKEHERLNLSRAG
SYRASLRASIRQRSRSQLSNLIPESFVPIAIERGPRDAVSQADKSKKEIPEEEIVEPAPV
GRILKYNIPEWPYMLFGSFGAAINGGVNPVYSLLFSQILATFSVTDPVAQRKEIDSICLF
FVIVGVISFFTQMLQGYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDHRNSPGALTTRL
ATDASQVQGATGSQIGMIVNSLTNIGVAVLMSFYFSWKLTLLILCFLPFIALSGGFQAKM
LTGFAKQDKEAMEIAGRISGEALNNIRTIAGLGKEKIFVDMYEAQLDGPYQAALKKSKVY
GACYGFAQCVIFLTNSASYRFGGYLVRQEGLHFSLVFRVISAIVTSGTALGKASSYTPDY
AKAKISAARFFQLLDRVPQISVYSDTGDKWDNFQGNIEFIDCKFTYPTRPDIQVLNGLNV
SVKPGQTLAFVGSSGCGKSTSVQLLERFYDPDQGRVLIDGHDSTRVSVPFLRSKIGIVSQ
EPILFDCSIEENIKYGNNSREISMNEVIAAAKKAQLHDFVMSLPEKYNTNVGAQGSQLSR
GQKQRIAIARAIIRDPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQ
NSDIIAVMSRGFVIEKGAHDQLMALKGAYYKLVTTGAPIS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgccggctggatcagtgaaattgcaaagcattaaaaaactgggacagaataaccacagc
tatgacttttcagatgaagaaccagctggctcctatacggccacggcaacttccaaggat
aatgacaaaaatcaggaaaatgatgagcaaccggcgataagggttggcttctttcagctg
ttccgttttgccacatgcaaggacgtgctgatgatggtggtgggcagtgtgtgcgcagtg
ctgcacggctcggcccagcctctcatgttgctggtgttcggcttgcttaccgacaccttc
atcgagtacgacatcgagctcaacgagctgagagacgacagaaaggagtgtgtgaacaac
accatccagtggaaaaagaactacccggaggggatcggccagatgacgccactgaaccag
tcgggctggagcctcatgaacaattcaacatgggagatgttcacaccgctggcgggcagg
ccgtgtggggttcttgacattgaatatgaaatgaccctatttgccttctattatgttgga
attggagcagctgtgttcctgctgggatactttcagatctccctgtgggtgacggccgct
gccaggcagattcagctcatcaggaagttgtacttcagcagagtgatgaggatggagatc
ggctggttcgactgcacctctgtaggggagctcaacactcgcatgtcagatgatatcaac
aagatcaatgatgccattgcggatcaagttgccatcttcctgcagcgcttcactaccttt
gtgtgtggtttctgcattggctttgtgaaagggtggaagttaacgcttgtcattgttgca
gcaagtccaatgatcggagttggagctggtcttatggctctgttcgtggctaagctaaca
ggaagggagctgcaggcctacgccaaagctggagctgtagcggatgaggtcctcacttcc
atcagaactgtggctgcttttggtggggagacaaaggaagtgcaaaggtacgacaggaac
ctgatctcagcgcagcgctggggcatcaggaagggtctgatcattggttttttcactgga
tatatgtggctgatcatctttctgtgctatggtctggccttctggtatggctccagcctg
gtggtgaccactggggagtacacaccaggaaccctactgcaggtgttctttggtgttttg
atagcagccatgaatttgggacaggcctcctcatgtctagaggcatttgctgcaggccgt
ggagctgctaccctcatatttgagactattgagagggagccggagattgattgtctatcc
gaggctggatataagcttgacagggtcaaaggagatattgagtttcataatgtgaccttc
tactacccctccagacctgacgtcaagatcctggaccagctcaatgttgcagtgaagtct
ggggagaccacagcctttgtcggtccgagtggagccgggaagagtactgctattcagctc
atccaacgcttctatgaccctaaagagggcatggtgaccctggacggtcatgacatcaga
gggttgaacatccaatggttgcgctcgctgattggcattgtggagcaggagcctgtgctg
tttgccaccaccattgctgaaaatttgcgctatggtcgacccaacatctccatggaagaa
attgtcagtgctgcgaaggaggccaacgcctacaacttcatcatggacctgcctcagcaa
tttgacaccttggtgggggagggtggaggtcagatgagcggcggtcagaagcagcggatt
gccattgctcgagccctggtcaggaaacctcgtatcctgctgctggacatggcaacctct
gcccttgacaacgagagtgaggctatagttcaagaagctttggataatgtacgcatgggt
cgcaccaccatctctattgctcaccggctgtccaccataaaaaacgcagatgtgattgtt
ggctttgagcatggccgagctgttgagaagggaaaacacaatgagctgctagagaggaag
ggagtctacttcactctggtcaccctacagagccaaggagacaaggctctgaatgaaaag
gctcggcaaatggctgacgatgacaaagagcatgagaggctaaacctgtccagagcaggc
agctacagggccagtttgagagcctctatccgccagcggtcccgatctcagctgtccaat
ctgatcccagaatcttttgttcccatcgctatagagcgtggccccagagacgctgtgtca
caggcagacaaatctaagaaggaaatcccagaggaggaaattgtggagcctgctccagtt
ggtaggatcctgaagtacaacatacctgagtggccctacatgctttttggatctttcggt
gcggccataaatggaggggtcaaccccgtctactctctgctgttcagtcaaatcctggcg
acattctcagtaacagatcctgtggctcagaggaaggagattgatagtatctgcctgttc
tttgtcattgttggcgtgatctctttcttcacacagatgctgcagggatatgctttctcc
aagtctggagagctgctgacacgcagattacggcggctcggcttccatgccatgctgggc
caagagattggctggtttgatgatcacaggaacagtcccggagctctgacaacacgtctg
gcgactgatgcctcacaagttcaaggagccacaggctcacaaatcggcatgatcgtcaac
tctctgaccaacattggcgtggccgtcctcatgtccttctacttcagctggaagctcacg
ctgctcatcctgtgcttcctgccttttatcgctctgtccggtggcttccaggctaagatg
ctaacggggttcgccaagcaggacaaggaggcgatggagatcgcaggacggatttctggc
gaggcactgaacaacatccgcaccatcgcaggcctggggaaagagaagatttttgtggac
atgtacgaggcccagctagacggtccataccaagcggcgctgaagaaatcaaaagtgtac
ggagcctgctatggttttgcccagtgcgttatctttttgaccaactccgcctcctacagg
tttggaggttacttggtgcggcaggaggggctccatttcagcttggtgttcagggtcatt
tcagccatcgtcaccagtggcaccgctcttggcaaagcctcatcttacacaccagactac
gccaaagccaagatttcagctgcacgtttcttccagctgctggaccgtgttcctcagatc
agcgtctacagcgatacaggagacaaatgggataacttccaaggcaacattgagttcatt
gactgtaagttcacctaccccacgaggccagacatccaggtcctgaatgggctgaatgtg
tcggtgaagcccggccagacgctggcctttgtgggcagcagcggctgcgggaagagcacc
agcgttcagctgctggagaggttttacgatcctgaccaaggcagagtgctgattgatggc
catgactcgactcgtgtcagcgtccccttcctgcgttccaagattggcattgtgtcccag
gagcccatcttgtttgactgcagcatcgaggagaacatcaagtacggcaacaactcgcgt
gaaatcagcatgaatgaggtcatcgctgccgctaagaaagcccaacttcacgacttcgtc
atgtcacttcctgagaaatacaacacaaacgtcggggcccagggttctcagttgtctcgc
ggtcagaagcagcgcatcgccatcgccagagcgatcattcgtgatcccaagatcctgctc
ctggacgaggccacctctgccctggacactgagagcgagaagaccgtgcaagaggctctg
gataaagccagagagggacggacgtgcattgttatcgcccatcgcctgtctaccatccag
aactcggacattatcgccgttatgtccaggggctttgtgatcgagaaaggagcacacgac
cagctcatggccctgaagggagcttactacaaactggttaccacgggggcaccaatcagc
taa
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