Etheostoma cragini (Arkansas darter): 117939357
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Entry
117939357 CDS
T07493
Symbol
mcf2la
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117939357 (mcf2la)
Membrane trafficking [BR:
ecra04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117939357 (mcf2la)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
UreE_C
Spectrin
PH_10
hSH3
Motif
Other DBs
NCBI-GeneID:
117939357
NCBI-ProteinID:
XP_034720517
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All DBs
Position
24:6685300..6723158
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AA seq
1181 aa
AA seq
DB search
MKDCTAIREYGGEKFVRISLGEMESYYRCIQCCQQLQNDILQREDGPFAAEIGHELQKQF
AILPGGRGINGNPIIIFPEFPDFSELEEEEVQNVLSYLSSIPSIAASGVGFNLVIDRRLD
RWAAVRATLLRIAGSFPGNLHLVLVLRPTTLLQRTLSDFLFKYNRDEFKMKVVMLSSVTE
LHAYIDPGQLTTELGGTLEYCHDSWISHRTAIEAFALMVKTTAQTLQAFGTELAETELPN
DAEATTNLLHTHTLKKDKMKEDLQVALSQGGRLLECINEPLQTDPEYSMTYDELENLATV
QRLLGQLDETQTAFDDFWERHHTKLEQCLQLRHFEQHFREVRPQLDVTAERLSGFSEVSV
SPAHAEHVLRELSSHEDKACDILDHALSLASEGDRLIENSHYAEDSIRPKCSELRGVCEE
ISSTLRSKKNLLLTALELHHALEKASRWCEDGIFLLASQPVDRCQSQDGAEAALQELERY
LDTAALHTLADCSSICCQYEAVLTTQLRDQVERVFQKQISVQEMFEKRRISLKKLAAKQT
RPVQPVAPRPEVKSPLSSPNQERKERRYSADNVICKKVESPIHNGGTRHASLSEEEENLA
VLRRHVMNELLETERAYVEELLCVLEGYAAEMDNPAMAHLIPSTLLSKKVILFGNMSEIY
YFHKRTFLKELEAYTDCPELVGRCFLERMKDLQIYEAYCQNKPRSESLWRQCSDCAFFQE
CQKKLEHKLGLDSYLLKPVQRITKYQLLLKELLKYSKGCDGCDDLQEALSSILGILKAVN
DSMHLIAITGYEGNLSELGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKAL
LFCKRREENGEGYEKAPSYSFKHSLSMSAVGFTENAKGDNKKFEIWCNSRDEVFIVQAPT
PEIKTAWVNEIRKVLTQQLKACRVNVSDASQQKSSDSVFPSPTSNNASISLSPFRSSGQK
NQKKQEEKKAETSMMSDSSSSPKHKDEPVTSPTTDRSSVAKKRFTLQGFSNLKSPKGSAL
SPEHSSKRHLVKSDPTPFGFKGWTKASLSVDASEENDGYSSSEDPINSDAEEEGGRKLAP
GKYTVVADCEKAGPQELSVKSGDMVQLIREGEEGQWFVKNLRSSKEGWVAAANLLSLISE
SKSSQSLSSSDLLLIDGSVSGNLSTSSSCSETYTSFSDIKP
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactgcacagcaatacgggaatatggaggagagaagtttgtccgcatctcactg
ggggagatggagagctactacagatgcatccagtgctgtcaacagctgcaaaatgacatt
ctgcagagggaggatggtccgtttgcagcagaaatcggccacgaactccagaaacagttt
gccatcctgccaggcggccgcgggataaacggcaaccctatcatcatcttcccagagttc
ccagatttcagcgagctggaggaggaggaggtccaaaatgtcctcagctacctcagcagc
atccccagcattgctgcatcgggagtgggtttcaatctggtcatcgacagacgactggac
cgatgggccgccgtcagggctaccctgctccgcatcgcaggttcatttccagggaactta
cacttggttctggtgttacgtcccactactttgctccagcggactctgtcggacttcctg
ttcaagtacaacagggatgagttcaaaatgaaggtggtgatgctgagttcggtgactgag
ctccatgcttacatcgacccaggacaactgaccacagagctgggaggcacgctggaatac
tgccatgacagctggatctcacaccgcactgccatcgaggcatttgccctcatggtgaag
accacggcgcagactctgcaggcgtttggcactgagcttgcagagacagaactaccaaac
gatgccgaggccactaccaacctgctgcacactcacactctgaagaaggacaaaatgaag
gaggacctgcaggtggcgctgtctcaagggggacgcctgttggagtgtataaacgagcct
ctacagacagaccctgaatacagcatgacctacgatgaactggaaaacttagctacagtt
cagagactcctgggtcaactggatgaaacacagacagcatttgatgatttctgggagcgt
caccacaccaagctggaacagtgtttacagctccgccattttgaacagcacttccgtgaa
gtccgcccccagctcgatgtgacagcggagcgtttgtcgggtttctccgaggtcagcgta
agccccgcccatgcggagcatgtccttcgagagcttagcagccatgaggacaaggcttgt
gacatactagaccatgctctgtccctggccagtgaaggtgacaggctgatagaaaattcc
cactatgccgaggactcgatcaggccgaagtgcagcgagctgagaggagtgtgcgaggag
atcagctccactctgaggagcaagaagaacctcctgctcacggcgttggagctccaccac
gctctggagaaggcatcacggtggtgtgaggacggcatctttctgttggccagccagccg
gtggaccgctgtcagtctcaggatggagccgaagcagctctgcaagaactcgagcgatac
ctggacacagcggcgctacacaccctcgccgactgcagctccatctgctgccagtatgag
gcggtgctcactactcagctcagggaccaggtagagagagttttccagaagcaaatctcc
gtccaagagatgtttgagaagagacgcatcagcctgaagaaacttgctgccaaacagacc
agaccagtccagccagtagcaccaagacctgaagtgaagtctccactctcctctcctaat
caagagagaaaagagagacgatactcggcagataatgtcatctgcaaaaaggtggagtct
cccatacataacggtggcaccagacatgcttctctctccgaagaagaagaaaacctggca
gtgcttcggcgccacgtgatgaatgaactgttggagacggagagagcatatgtggaggaa
ctactgtgtgtgctggagggctatgcagctgagatggacaaccctgccatggctcacctc
atccccagtaccctgctgagcaagaaggtcatcctatttggcaacatgtctgaaatctac
tactttcataagaggacgtttctaaaggaactggaagcatacactgactgcccagaacta
gtgggccgctgctttttagagaggatgaaggacctgcaaatctacgaggcgtactgccag
aataaaccacgctctgagagcttgtggagacagtgctccgactgtgccttcttccaggag
tgccagaagaagctggaacataaactcggtttggactcctacctccttaaacctgtccag
agaatcaccaagtaccagctactgcttaaggagttgttgaagtacagtaagggctgcgat
ggctgtgacgacctacaggaagcgctctcctccatcctggggatcctgaaagcagttaac
gactccatgcacctcatcgccatcacaggatacgagggtaacctgtcggagctgggtcgc
ctgctgatgcagggctccttcagtgtgtggacggagcataaaaaaggccacgccaaggtg
aaagacctggcccgctttaaacccatgcagaggcacctgttcctgcacgagaaggccctg
ctcttctgtaagaggagggaggagaacggggagggctacgagaaagctccgtcttacagc
ttcaagcactccctcagtatgagtgcggtgggctttacagaaaacgctaaaggagacaac
aagaagtttgagatttggtgcaactccagagacgaagtttttatagtccaggctccaaca
ccagagattaaaacagcgtgggtgaacgagatccgcaaagttttaacccaacagctcaaa
gcctgcagagttaatgtttcagatgccagtcagcagaagagctcagactctgttttcccg
agtcccaccagcaacaacgcctccatctccctcagtccctttcgtagcagtggtcagaaa
aaccagaagaagcaagaggagaagaaggcggagacaagcatgatgtctgactcctcttct
tcaccgaaacacaaagatgaaccagtgaccagtccgaccactgacaggtcctcagtggct
aaaaagcgttttactttgcagggcttcagcaatctcaagagtccaaaaggctcggccctg
agccccgagcactcctccaaacgccacttggtcaagagtgaccccacaccgtttgggttc
aaaggctggaccaaggcgtctctctcggtggatgcctcagaagagaatgatgggtactct
agcagcgaggaccccataaactctgacgccgaggaagaaggaggaaggaagctggctcca
ggaaagtatacagtggtagcggactgcgagaaggcgggacctcaggagctgtccgtcaag
agtggagacatggtccagcttatccgagaaggagaggagggacagtggtttgtgaagaac
ctccgcagcagtaaggagggctgggtggcagcagcaaacctcctcagcctcatctcagag
tccaagtcatcccagtcgctcagcagctcagatttgttgctgattgatggcagcgtctct
gggaacctcagcacttcttccagctgcagcgagacctacaccagcttctccgacatcaaa
ccctga
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