Etheostoma cragini (Arkansas darter): 117939366
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Entry
117939366 CDS
T07493
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117939366 (sox1b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117939366 (sox1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117939366
NCBI-ProteinID:
XP_034720540
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All DBs
Position
24:complement(6917249..6919199)
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AA seq
355 aa
AA seq
DB search
MYSIMMETDLHSPVMPQTNPSNPGGHAGGGGGGPGGKVPQDRIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSPAGVGMGGGQRLESPGGGHAGANAGYATHVNGWANGTYSGQVAA
AAAAAHAMMQEAHLAYTQHPGTGAHPHHPHHPHHPHHHPHNPQPMHRYDMNALSYSPISN
STQSYMSASPPGYGGITGYTHQHQSSGISPVSGTIGGTLGSLVKSEPSVSPPVSTARAPP
PCPTGDLRDMISMYLPTGEAAGDSTVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggaaacggacttacattcccccgtgatgccccagactaaccca
tccaacccggggggacacgcgggaggtgggggcgggggacccgggggcaaagtcccccag
gacagaatcaagagacccatgaacgcattcatggtctggtcccggggccagaggcggaaa
atggcacaggagaaccccaaaatgcacaactcggagatcagcaagcgtttgggtgcagag
tggaaggtgatgaccgaagcggagaaaagaccgttcatcgatgaggcaaagcggctccgg
gccatgcacatgaaggaacacccggactacaagtaccggccgcggaggaagaccaagacg
ctgctgaagaaggacaaatactcgctggcaggcgggctcctcggctcacctgcgggtgta
gggatgggcggcgggcagcgactggagagccctggagggggccacgcaggggcaaatgcg
ggctacgccacgcacgtgaacggctgggcaaacggcacatactctggccaggtggcggct
gcagcagcggcggctcacgcaatgatgcaagaggcgcacctggcatatacgcaacacccg
ggtaccggagctcacccgcatcacccgcatcatccgcatcacccacatcaccacccccac
aacccgcagcccatgcacaggtacgacatgaacgccttatcttacagccccatctcaaac
tctacacaaagctacatgagcgcctctccgccgggatacggtggtatcaccggctacact
caccagcaccaaagctctggtatctccccggtgtccgggactatcggagggactttgggg
tcccttgtgaaatctgagcccagcgtgagccccccagtttccacggctcgggcaccacca
ccgtgccctacgggggacctgcgggacatgatcagcatgtatctgccgaccggcgaagcg
gcgggggactccacggttcatagtagattgcacgtgcttcacccgcagcactaccagagc
agcggctccactccggtaaacgggacggttcccctgactcatatttaa
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