Etheostoma cragini (Arkansas darter): 117939389
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Entry
117939389 CDS
T07493
Symbol
adamts1
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 1
KO
K08617
a disintegrin and metalloproteinase with thrombospondin motifs 1 [EC:3.4.24.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117939389 (adamts1)
Peptidases and inhibitors [BR:
ecra01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117939389 (adamts1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
TSP1_ADAMTS
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
TSP1_spondin
Pep_M12B_propep
Adt-1
Reprolysin_3
ADAMTS_CR_3
TSP1_CCN
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117939389
NCBI-ProteinID:
XP_034720601
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All DBs
Position
24:6058531..6064227
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AA seq
944 aa
AA seq
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MWGLHVSIGLIAALCVGAAPSAWEKSTVVPVKLDPAARSESETEPRRTLSAEEKEKEAEM
REYRLDVFGKELLLQLEPDQTFLAPGFVFHIVGSPDSKLTQEPKSGAEPGCFFSGTVNGE
EHSAAALNLCHGLRGGFYFQGEEYFIQPLNSSDFMGTEKDVHMIRRRGRAALAEEGSAKC
GVNEDEEKVPKNLEKEAKHRAANADQTAHHRTRRFISTPRYLEIMLVADQSMAEFHGAGL
KPYLLTIMAVASRLYRHPSIHNSITLAVVKLLVVYEEERGPQVSSNAAMTLRNFCQWQKQ
HNQPSDRHPEHYDTAVLFTRTDLCGAHSCDTLGMADVGTVCDPDRSCSIIEDDGLQAAFT
VAHELGHVFNMPHDDAQLCSGVNGAHWGSHMMASTLSNLDQQQPWSPCSALMVTSFLDNG
HGQCLLDKPVKPQPLPQPLPGTVYDADHQCRLTFGDDSQHCPDLSTTCAALWCTVTTSNG
LLVCQTKNFPWADGTTCEHDSYCLAGHCVSKDKASLQTPVNGGWGLWGPWGDCSRTCGGG
VQYSFRSCDNPLPKNGGKYCEGKRIQYRSCNTDTCPDTNGLSFREEQCLAHNDMSAQVSL
GSGDGVEWVPKYAGVSPKDRCKLVCRAKGTGYFFVLKPKVADGTPCSPDSTSVCVQGQCV
KAGCDRVIGSNIRFDKCGVCGGDGSTCKKVTGSLERARPGYQDVVTIPAGATHLDVKQRA
PGNGRPDNSYLAVRRQDGSYLLNGEYKLMTMETDITLQGALLRYSGSSASLERLRSFAPL
PEPLTIQVLSVGEAPRPRVKYSYFAPRPNNAASVSIINGGRRQSINAIREVGGAEWTLRE
WGPCSKTCGVGMQQREVVCLDPHGRPSRDCPEELRPLASRSCATQSCPSWLLGEWSVCSK
TCGRGFRKRPLRCIGHDGRTLTHDSCDPKNRPRPLLELCNQSAC
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtttacacgtttccattggtttgatcgctgctctgtgcgtcggcgcggcgccc
agcgcctgggagaagagcaccgtggttccggtcaaactagacccggcggcccggtcggag
agcgaaaccgaaccgcggcggactctctccgcagaggagaaggaaaaggaggcggagatg
agggagtaccggttggacgtatttggcaaagagctgttattgcagctagagcctgaccag
accttcttggcgccgggttttgtcttccacattgtggggagtcctgattccaaactgaca
caggaacccaagagcggagccgaaccggggtgtttcttctctggcacggtaaacggagag
gaacactctgccgctgcgctaaacctgtgccacggactcaggggaggattctactttcag
ggggaagaatattttattcagccccttaactcgagtgacttcatgggcaccgagaaggat
gtccacatgatccgcaggagaggtcgagcagctctggctgaggaggggagtgccaagtgc
ggggtcaacgaggacgaggagaaggtgccaaagaatttggagaaagaagccaagcacaga
gccgctaacgcagaccagacagcccaccacagaacccggcgtttcatttccacccctcgc
tacctggagatcatgcttgtggctgaccagtccatggctgagttccacggcgccgggcta
aagccctacctactgaccatcatggcagtggcatcccgcctttatcgccaccccagcatc
cacaactccatcactctggcagtggtgaagctgctggttgtatacgaggaggaaagaggc
ccccaggtgtcctctaacgccgcaatgactctccgcaacttttgccagtggcagaagcag
cataaccaaccaagtgaccgccaccctgagcattatgacactgcagtgctatttaccagg
acggatctgtgtggtgctcactcttgtgacactctgggcatggcagatgttggcaccgtg
tgtgaccctgacagaagctgctcaattattgaggatgatgggctgcaagcagcatttact
gtggcacatgagctgggccacgtcttcaacatgccccatgatgatgcccagctgtgctct
ggggtcaacggtgcccactggggctcccacatgatggcctcgaccctgtccaacctggac
cagcagcagccatggtctccctgctccgccctcatggtcacatccttcctggacaacggc
catggtcagtgcctgctggataaaccggtcaaacctcagccgctccctcagcccctgccc
gggacggtctatgatgccgaccatcagtgtcggcttacctttggcgacgactcccaacac
tgccctgatctgagtaccacgtgcgctgccctgtggtgcactgtgaccacatccaatggt
ctgctggtgtgccagactaagaacttcccctgggctgatggaacgacatgcgaacatgac
agctactgcttggccggacattgtgtctccaaggacaaagccagtctccagactcctgtc
aatggtggctggggattgtggggtccctggggcgactgctctcggacctgtggtggaggg
gtgcagtattcctttcgttcctgtgacaaccctttgcccaagaacgggggcaagtactgt
gagggcaagaggatccaataccgctcctgtaacacagacacctgccctgatacgaatggc
ctgtcattccgcgaggaacagtgcctggcccacaacgacatgtcagcccaagtgtctctg
ggttcaggcgatggtgtcgagtgggtgcccaagtatgctggagtttcacccaaagaccgc
tgcaagctggtgtgccgggccaaggggactggatacttctttgtcctgaaacctaaggtg
gctgatggcacaccgtgcagccccgactccacctcagtttgtgttcaaggccagtgtgtc
aaggctggatgtgatcgcgtcatcggctctaacatacgctttgataagtgcggtgtgtgt
ggtggagacggctctacctgcaagaaagtgacaggctctctggaacgtgccaggcctggt
taccaggatgttgtaaccatccctgctggtgccacccaccttgatgtcaagcagcgtgcc
ccaggcaatggtcgtccagacaacagctacctggcagtgcgtcgccaggatggaagctat
ctgttaaatggtgaatacaaactgatgaccatggagaccgacatcaccttgcaaggggca
cttttgcgatacagtggctcctccgccagcctggagcgcctccggagcttcgccccactc
cccgagcccctcaccatccaggtgctgtctgtgggggaagccccaaggccccgggttaag
tacagctactttgccccgagacccaacaatgctgcttcagtctctatcatcaatggaggc
cgccgccagtccatcaatgccatcagagaggtgggtggagccgagtggaccctgagggag
tggggtccgtgctccaagacctgtggagtaggtatgcagcagagagaggtggtgtgtcta
gatccccatggtcgtccctctagagattgcccggaggagctgcgccccttggcctcacgg
tcgtgcgccacccagtcctgtccctcctggcttctcggagaatggtcggtatgctcaaag
acctgcggccgaggcttccgcaaacgcccactgcgctgcatcggccacgatgggcgcacg
ctaacccatgacagctgtgaccccaaaaaccgtccacgacccctgctggaactgtgtaat
cagagtgcctgttaa
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