Etheostoma cragini (Arkansas darter): 117939452
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Entry
117939452 CDS
T07493
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K23219
methyl-CpG-binding domain protein 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117939452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117939452
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117939452
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117939452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
117939452
NCBI-ProteinID:
XP_034720701
LinkDB
All DBs
Position
24:complement(12043253..12072761)
Genome browser
AA seq
1449 aa
AA seq
DB search
MNGGKDCEAGDERQAIPVQVPIGWQRKAEHSGGVLYMSPSGSVLSSLEQVKTYLLTDGTC
KCGLECPLILHKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKLLAVATLHKSMGTHP
PLTLTSPGGGTSSVVAAHSTTQRAIRTKPHDGLPNAAGPDCKNPFKMMMAPGQQQQQRLY
PPQEMVGAQQTELYSGYHRHQRLGSGEQGPKSPYRVGYGGMLSPPPSSAKLYGDGSQSPS
ADTLGSPDGFPRTNPCGFPGAGSPGSASIHGNSRTPLSPPSVMLHGSPAGQPSCAMTGRT
STPLSPTVTAKSPVMNMNMPRGNFPPGMDMPRAGFHHKTHLIPPPSSIPPSCALQKRQLT
SEKDPLGILDPIPSKPVSQPPANIPNPSNFQPNIHSQVQMMNVNIPPPAIVPLPSNLPLP
TVKPGPVGHGGHVQRTQQVGPPSSMSPSPVTSPVHMAGPALGRMEASPHRSRSSSTSSDH
GNFAMPSGHQAPCGNMKVPPRSPRSAMGSPRPAMPSSPSTNKTDPHHQYKDSQMLPGMGN
SIGTQQHSNPMYSPTSSSSSSSSMATPSASQKGHPGLLGMPLNQILNQQNAASFPASSLL
SAAAKAQLANQNKLSAAGNSPAGNSPAGMAGGGVGMAGMGAGGGGSGGGGGHPGSMSGPR
GLEGHSTLNSMLPPNSTMLLNTPEGQSGRAALRDKLMAQQRDPMRKRKQSSGSAAVNHDN
SNNMVYNMLNKRGMGGPHMAGPIATEQLRKVGRLGNLPPNTSMAQLLQSMSCQSTHNHRP
GVSPGPGPQGSAQLHYNDSTVLVPGGPQQNLIAQQRLRGPGDAMQHCQNMDTSGGHMGSR
PGQFPDIIAQMQASSMSNSGPMGPGGGPVGPEGMPLGRPNPNPPPLSHPGPHPSQHNHLH
GMGRTSMVLMPHVGGDGSCTQTISDTGNPSSLGCGIGGLQPHITTGGGQMYQQQVHQGMQ
QGVATHPAYKGQTHFSDNSPYTDGNNANANASSMACLYQNYQPGMLSHPQFREGQQPQGE
GLPAGTAGGDRGPGGQESVDAIYRAVVDAASKGMHVTITTTVSGTTQASPVPALSAMSAF
TASIGEPVNIPQAVSTVLHRHQDGEALPMQARPRQVRPGRGQKNMDPGKSTPDCPEANDF
FRSPGRGTPRGQWDGDAQHGGCFDPHSNNSAWGSEEFLECSTQVRSSPCMERPASLAPAP
PCPTDGSNDHGLVMAHDKAFLDDGYRFNNCNRTPANYKERLEQTVERCVHINGATPHFNT
RGYGEVLGPPRQELTGDDQSPSSSTSLEGPLATAKDYSHYNGHFNGMAPSPSDTKSLSSE
EDLRQPDSPSSELLHYRSRTFNMGELVWGQLKGFPPWPAKLAGDEQVHSAALQLRDQAKV
EPEKLKTLTHDLEVLDRAAKRGLKQGKLNNHLEAAIHEAMSELDKMSGTIPSRDRQVKLP
KPKRRKISR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaggactgtgaggcgggagatgagaggcaggccatccctgtccaggtc
cccattggctggcagcgcaaggcggagcacagtggcggggtgctttacatgagtcccagt
ggctcggtgctgtccagcttggagcaggtgaagacctacctgctgacggatggaacctgc
aaatgcggcctggagtgcccactcatcctccacaaggtgttcaactttgacccaggggca
gctgtcaagcagaggacagcagaggatgtaaaagcagatgaagacgtcaccaaactctgc
attcacaagaggaagcttctggctgtggccacgctgcacaagagcatggggacgcaccca
cctctgacgctgaccagtccggggggaggtacatcgtctgtggttgctgcgcattccaca
actcaacgagcaataaggactaaaccccatgatggattgccaaatgctgctggcccagac
tgcaagaatcctttcaagatgatgatggccccgggacaacagcagcagcagaggctgtat
ccaccacaggagatggttggagcccagcaaaccgagctctactctggctaccacaggcac
cagagactgggcagtggggagcaaggccccaaatccccctaccgggttgggtatggaggc
atgctgagcccacctccctccagtgctaagctgtatggagacggctcacaatctcccagt
gccgacactctgggcagccctgatggctttccaaggaccaatccttgtgggtttccagga
gctggcagtccaggctcagcctctatccatgggaactctaggacgcctctttccccaccc
agtgtaatgcttcatggctcccctgcgggccagccatcttgcgccatgacggggaggact
agcacgcccctttcccctacggtcactgccaaaagccctgtcatgaacatgaatatgcct
cgggggaactttccccctggtatggatatgccccgtgcagggtttcaccataaaacacat
ctcataccgcctccttcatccataccaccatcctgtgccctacagaaaaggcagttgacc
tccgaaaaagacccattaggcatcctggaccccatccccagcaagccagtcagccagccc
cccgccaacatcccaaacccctccaactttcagcctaacatccactctcaggtacaaatg
atgaatgtaaacataccccctcccgccattgttcccttgccaagcaacttacctttaccc
acagtgaagcctggacctgtggggcatggcggtcacgttcaaaggactcaacaggttggt
ccgccttcctctatgtctccctcccctgtcacttcccctgtccacatggcagggcctgcc
cttgggagaatggaggcctcccctcatcgctcacgctcatcctccacctcctctgaccat
ggcaactttgcaatgccctcgggacatcaggccccatgtggcaacatgaaggtccctcct
cgttcccccaggtccgccatgggatctcccagaccagccatgccctccagcccctccacc
aacaaaactgacccacatcaccagtacaaagactcccagatgctgcctgggatgggaaac
tcgattggtacccagcagcacagcaaccccatgtactcacccacctcttcctcctcgtcg
tcctcttctatggcaaccccaagcgcttcccagaagggccacccaggactcctggggatg
cctctaaaccagatcctcaaccaacagaatgccgcttcctttcccgccagcagtctcttg
tctgccgcagccaaagcacagctagcaaatcaaaacaaactcagcgctgcgggcaacagc
cctgctggcaacagccctgctggcatggctgggggtggtgttggtatggcaggcatgggg
gctggtggcggaggttctggtggaggtggcggacaccctggctctatgagcggccctcga
ggcttggagggacacagcactttaaactcaatgctcccgccaaactctaccatgctgctc
aacactcctgagggccagagtggccgcgcggctctaagagacaagctcatggcccagcag
agggaccccatgcgcaaacggaagcagtcatcgggcagcgctgccgtaaaccacgacaac
agtaacaacatggtctacaacatgcttaacaaacgaggcatgggaggaccccacatggca
gggcccattgccactgagcagctgcgaaaagttggacgacttggaaaccttcccccaaac
acctccatggcccaacttctccagtccatgagctgccagagcacccacaaccatcgtccg
ggtgttagccctggcccggggcctcaaggatctgcacagctgcactacaacgacagcaca
gttttggtccctggtggccctcagcagaatctcatagctcaacagaggctgcggggtcct
ggagatgccatgcaacactgccagaacatggacacctctgggggccatatgggctctcgt
ccaggccagttccctgacatcatagcccagatgcaggcctcctccatgagtaacagtggt
cccatggggccaggaggtggaccggtgggtcctgagggcatgccgcttgggcgccccaac
cctaaccccccgccgctgtcccatcccggccctcacccctcacagcacaaccaccttcac
ggtatggggcggactagcatggtgctgatgccacatgtaggtggtgatggaagctgtaca
cagaccatctcggatacaggaaacccctcatcccttggctgtggtattggcggcctgcag
ccacacatcaccaccggcggaggtcagatgtaccagcagcaggtccaccagggcatgcag
cagggggtggccacccatccagcctacaagggacagacgcacttctctgacaactcaccc
tacacagacggcaacaacgccaatgccaacgccagctccatggcctgcctctaccagaac
taccagccggggatgttgtcgcacccacagttcagggaggggcagcagccccagggcgag
gggcttccagcgggtacagctggcggggacaggggacccggtggccaagagtcggtggac
gccatctacagagccgtggtggatgccgcgagcaagggcatgcacgttaccataacaacc
acagtgagcgggacaacacaggcgagtccggtgcctgccctcagcgctatgagtgccttc
actgcctcaataggggagccggtcaacatcccccaagcagttagcacggtcctgcacagg
caccaggacggggaggcgttacccatgcaagccagaccgagacaggtgaggcccggacgg
ggtcagaagaacatggatccagggaagagcactccagactgcccagaggccaatgacttc
ttccgttctcctggccgtgggacgcccagggggcagtgggacggggatgcgcagcacggg
ggatgcttcgatcctcacagcaacaacagtgcctggggtagtgaggagtttctagagtgc
tctacccaagtgaggagtagtccctgcatggagcgacccgccagcctggcccctgccccg
ccctgccccactgatgggtccaacgaccacggcctggtcatggctcacgataaggccttt
ctcgacgatggctatcgcttcaacaactgcaaccggacacccgctaactacaaggagcgt
ctggagcagacggtggagcgctgcgtccacatcaacggtgccacacctcacttcaacacc
cgaggttatggagaagtcctgggccccccgcggcaggagctgacgggggacgaccagtcg
cccagctcctccactagcctggagggaccgctggccacagccaaagactacagccactac
aacggccacttcaacggtatggcgcccagcccctcggacacaaagagcctgagcagcgag
gaggacctgcggcaaccagactctccctcctcagagctgcttcactaccggtctaggacc
ttcaacatgggagagctggtctggggccagctaaagggcttcccaccttggcctgccaag
ctggccggggatgaacaagtgcacagcgctgctttacagctgcgggaccaggccaaggtg
gagccagagaagctaaaaacactaactcacgacttggaggtacttgatcgagccgccaaa
agaggcctgaaacagggaaaactgaataatcacttggaagctgctatccacgaggccatg
agtgagctggataagatgtcgggcacaatcccgtcgcgggatcgtcaggtgaagctcccc
aagcccaagaggagaaagatatccagataa
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