Etheostoma cragini (Arkansas darter): 117939453
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Entry
117939453 CDS
T07493
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117939453
Pattern recognition receptors [BR:
ecra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117939453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
NOD2_WH
PRY
LRR_1
LRR_4
SPRY
Motif
Other DBs
NCBI-GeneID:
117939453
NCBI-ProteinID:
XP_034720703
LinkDB
All DBs
Position
24:10849838..10859223
Genome browser
AA seq
1419 aa
AA seq
DB search
MSQCEDREEGVPPPKPSLCGDHDSQTKAQSPDKQHGPGSGPVPGPRSRPSCLSFKSDRSK
DFCVTFKYDEKIHKGSDCPGPVPSCVSMKSDRSMGCPLTLFKDGRQSVDQRTNLEEPEPS
CVSVKSDWSMSQPLYFKDGCHSVDQRVDQESSEAPSGQSAQQHQTHLDSIFKLLEDEIVT
FVKNELRKIQKVLSPDYPECLESPRKYEEMSAHEDEEQRRNRREAFLKITLYFLRRMKQD
ELADRLQSRSYCGVCKCKLKCNQQKKFQCVFEGIPKAGNPTPLNQMFTEIYLVEGGAAEV
NDEHEVRQIETASRKPDRQETTIRQEDIFKTPPGRDKSIRTVMTKGVAGIGKTVLTQKFT
LDWAEGKANQDIQFTFPFTFRELNVLKERKFSLVELVDYFFSETKEAGICRFEEVVFIFD
GLDECRLPLDFLNTEILTDVTESTSVDVLLINLIRGKLLPSARLWITTRPAAANQIPPGC
VDMVTEVRGFTDAQKDKYFRKRFRDEEQASRIISHIKRSRSLHIMCHIPVFCWITATVLE
DVLKTREEGELPWTLTELYIHFLVVQSKMKNIKYDGGAETDPHWSSESRKIIECLGKLAF
EQLQKGNLIFYESDLAECGIDITTASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLA
ALHVHLTCNNSGVNLLAEEHKTSKLSKFFRDKQSFYRSAVDKALQSPNGHLDLFLRFFLG
LSLQTNQSLLRGLMTRTGSSSKTNQKTVEYIKKMHSENLSVERSINLFHCLNELNDRSLV
EQIQQFLSSGSLSKEKLSPAQWSALVFILLSSEEDLDVFDLKNYSASEEALLRLLPVVKA
SNKALYMHTQLYRLNGVFFIIKQISCNCFLIFYFLSFRLSVCKLSKRSFEALSSVLSSQS
SILRELDLSNSNLQNSGVELLSTGLISPNCTLETLRLSGCKLSKRSCEALSQVLSSQSSS
LRELDLSNNSLQDSGVKLVSSGLKSLHCRLDTLRLSSCNLSERSCEALSSVLSSQSSSLR
ELDLSINNLKDSGVELVSPGLNSPNCRLGTLRLNSCKLSKRSCKALSSVLSSQSSSLREL
DLSNNNLQDSGLELVSAGLNSLHCRLETLRLCGCNLSERSCGDLSSVLSSHSSSLRELDL
SNNELQDSGVKLVSPGLKSPHCRLGTLSLSGCLVSEKGCTSLVSALSSNHSHLRVLDLSY
NHPGDSGVKLLSAGLKNPHWRLDTLKTDHGGPQRLRPGVRKYVCELELDTNTVHRGLKLS
DNNRKVTGVREDQSYPDHPERFDCWSQLLCRDGLTGRCYWEVERRGRVEISLSYRGIRRR
GDSEDCWFGGNDQSWSLFCSDDGYSVRHNKRVTALTSSSVSNRVAVYVDCPAGSLSFYTV
FSDSLIHLHTVYTTFTEPLYPGFGVWLPGSSVSLCPLQD
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgaggacagagaggagggagtccctccccctaaaccctctctgtgtggg
gaccatgacagccagaccaaagctcagagcccagacaagcagcacggacctggatctgga
cctgtacctggacccagatccagacccagctgtttgtccttcaagagtgaccgttcaaag
gatttttgtgttacttttaaatatgatgaaaagatccataagggatcagactgccctgga
cctgtacccagctgtgtgtccatgaagagtgaccggtctatgggttgtcctcttacactc
ttcaaagatggacgccagtctgttgatcaaaggacgaatctggaagaacctgaacccagc
tgtgtgtccgtaaagagtgactggtctatgagtcaacctttatacttcaaagatggatgc
cactctgttgatcaaagagtggaccaggagagttcagaggctcccagtggacagtctgcc
cagcagcatcaaacccacttggactccatctttaagctgctggaggatgaaatcgtcact
tttgtgaagaacgagctgagaaagatccagaaggttctgagtccagattacccagaatgc
ttagagagtccgagaaagtatgaggagatgtcggcccatgaggatgaagagcagaggagg
aaccgcagagaggcatttctgaagatcacactgtacttcctgaggagaatgaagcaggat
gagctggctgaccgtctgcagagcagaagttattgtggtgtttgtaagtgtaaactcaaa
tgtaaccagcagaagaagttccaatgtgtgtttgaggggattcctaaagcaggaaaccca
acccctctgaatcagatgttcacagagatctacctcgtggagggaggggctgcagaggtt
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagacaagaa
acaacaatcagacaagaagacatctttaaaaccccacctggaagagataaatcaatccga
acagtgatgacaaagggtgtggctggcatcgggaaaacagtcttaacacagaagttcact
ctggactgggctgaaggcaaagccaaccaggacatccagttcacattcccattcaccttc
agagagctgaatgtgctgaaagagagaaagttcagcttggtggaacttgttgattacttc
tttagtgaaaccaaagaagcaggaatctgccgatttgaagaggtcgtgttcatttttgat
ggtctagatgagtgtcgactgcctctggacttcctcaacactgagatcctgactgatgtt
acagagtccacctcagtggatgtgctgctgataaacctcatcagggggaaactgcttccc
tctgctcgcctctggataaccacacgacctgcagcagccaatcaaatcccccctgggtgt
gttgacatggtgacagaggttagagggttcactgatgctcagaaggacaaatacttcagg
aagagattcagagatgaggagcaggccagcagaatcatctcccacatcaagagatcacga
agcctccacataatgtgccacatcccagtattctgctggatcactgctacagttttggag
gacgtgttgaagaccagagaggaaggagagctgccctggaccttgactgagttgtacatc
cacttcctggtggttcagtccaaaatgaagaacatcaaatatgatggaggagctgagaca
gatccacactggagttcagagagcaggaagattattgagtgtctaggaaaactggctttt
gagcagctgcaaaaaggcaacctgatcttctatgaatcagacctagcagagtgtggcatc
gatattactacagcctcagtgtactcaggagtgttcacacagatctttaaagaggagcga
ggactgtaccaggacaaggtgttctgctttgtccatctgagtgttcaggagtttctggct
gctcttcatgtccatctgacatgcaacaactctggagtcaacctgctagcagaagaacac
aaaacatccaagctgtctaaattcttcagagacaaacaaagtttctatcggagtgctgtg
gacaaggccttacaaagtccaaatggacatctggacttgttcctccgcttcttcttgggt
ctttcactgcagaccaatcagagtctcctacgaggtctgatgacacgtacaggaagtagc
tcaaagactaatcagaaaactgtggagtacatcaaaaagatgcacagtgagaatctgtct
gtagagagaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctctagtg
gagcagatccaacagttcctgagctcaggaagtctctcaaaagaaaaactgtctcctgct
caatggtcagctctggtcttcatcttattgtcatcagaagaagatctggacgtgtttgac
ctgaagaattactctgcttcagaggaggctcttctgaggcttctgccagtggtcaaagcc
tccaacaaagctctgtacatgcacacacagctatacagattaaatggagttttctttatt
atcaaacaaattagttgtaattgttttctcatattttactttttatcttttaggctgagt
gtctgtaagctgtcaaagagaagctttgaagctctgtcctcagttctcagctcccagtcc
tctattctgagagagctggacctgagtaacagcaacctgcagaattcaggcgtggagctg
ttgtctactggactaatcagcccaaactgtacactggaaactcttagactaagtggctgt
aagttgtcaaagagaagctgtgaagctctgtcccaagttctcagctcccagtcctctagt
ctgagagagcttgacctgagtaacaacagcctacaggattcaggagtgaagctggtgtcc
tctggactgaagagtctacactgtagactggataccctcaggttaagtagctgtaacctg
tcagagagaagctgtgaagctctgtcttcagttctcagctctcagtcctctagtctgaga
gagctggacctgagtatcaacaacctaaaggattcaggagtggagctggtgtctcctgga
ctaaacagtccaaattgcagactgggaactctaaggttaaatagctgtaagctgtcgaag
agaagttgtaaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctg
gacctgagtaacaacaacctgcaggattcaggactggagctggtgtcagctggactgaat
agtctacactgcagactggaaactctcagactatgtggttgtaacctgtcagagagaagc
tgtggagatctgtcctcagttctcagctcccactcctctagtctgagagagctggacctg
agtaacaacgaactacaggattcaggagtgaagctggtgtctcctggactaaagagtcca
cactgcagactgggaactctcagtctgtcaggctgtctggtctcagagaaaggctgtact
tctctggtctcagctctgagctccaaccattcccatctgagagtgctggacctgagctac
aatcatccaggagactcaggagtgaagctgctgtcagctggacttaagaatccacactgg
agactggacactctcaagacggaccatggtggaccacagagactgagacctggtgtgagg
aagtatgtctgtgaactggaactggacacaaacacagtacacagaggactcaaactgtct
gacaacaacaggaaggtgacaggtgtgagagaggatcagtcatatcctgatcatccagag
aggtttgactgctggtctcagctgctgtgtagagatggtctgactggtcgctgttactgg
gaggttgagaggagaggtagggttgaaatatcattgagttacagaggaattagaaggaga
ggagatagtgaagactgttggtttggaggaaatgatcagtcctggagtctgttctgctct
gatgacggttactctgtccggcacaataagagagtaacagccctcacttcctcctctgtc
tctaacagagtagcagtgtatgtggactgtcctgctggctcgctgtccttctacacagtc
ttctctgactcactgatccacctccacaccgtctacaccacattcactgagcctctctat
cctgggtttggagtctggttacctggttcctctgtgtctctgtgtcctctgcaggactga
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