Etheostoma cragini (Arkansas darter): 117939473
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Entry
117939473 CDS
T07493
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117939473
04121 Ubiquitin system [BR:
ecra04121
]
117939473
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117939473
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117939473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
117939473
NCBI-ProteinID:
XP_034720742
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Position
24:10731895..10735479
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AA seq
681 aa
AA seq
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MEGKSSGPSCSGPNLVAHPRAKSKVWKYFGFDTDAYGCILHWKRIYCRVCMSQIAYSGNT
SNLSYHLEKNHPVEFSEFVKSNTDQMREAFASAFSRIKTEPTGPHVQQQSQDPNVRQSSG
NENRRHNDLTTAVVNFICEGLYPASVVEEPTFKTLMSTVDPGYSPPSKSEMAVKMLPQMY
CRARDMVFSELAGVVNCGVTTDLWQSQTQNRSYISLSVHSVNYNSTSGFSMTNKCLKTFE
VQEDNTAENITRAMYEAFVEWGITHKVSGATTNGSVDIMKACSLLELSVEMPCLGHTVNR
AIAEAFQLPRVDSFLGCCRKLIDHFREPAMYLLRDKQKQHGLPQCALVTDRGRSWLATLA
MLQRLKEQQVVVTATLVESSSAHRFSFDGPDWALLEGLICVLQPLKVVANMITSCRYPTI
SMVRPVLHMLLNTTLKVKEGDLKEISMTKEVISKVLSSTYSQNTQLSQEISTFLNIATFL
DPRYKKLPFLSTQERSKIESNIIDEAKAVIEKQIAERPCLGEFSLTSDEPPCKKQTPLRE
ASAGSATQDNPLAAIFRQSDADQSQEELHAQVVEELSNYKSQRVLGLNEDPLLWWSSHAP
LFPTLPKVLQKYWCVPATSVPPHRLFSSSGTVLSGKRNRLVPALVDQQVFLYENSQSYCE
PELCENDLDNEGSGNLGRQLE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaaagttcaggaccttcatgctctggacccaatctggtcgcacacccacgg
gcgaaaagcaaagtctggaaatactttggctttgacacagacgcatatggctgcatattg
cactggaaacggatttactgccgtgtatgcatgagtcaaatcgcctactctggaaacacc
tccaatctgtcttaccaccttgagaagaaccaccccgtagagttcagcgagttcgtgaag
agcaacacggatcagatgcgagaggcgttcgcgtcagcgttctccaggataaagaccgag
cccacgggtccgcacgttcagcagcaatcccaagaccccaacgtaaggcagagctcgggc
aatgaaaaccgacgacacaatgatctgacaaccgctgtcgtcaacttcatctgtgagggg
ttgtaccccgcgtcggtcgttgaagagcctactttcaagacgttaatgagtaccgtcgac
cctgggtactctccaccgagcaaaagcgagatggcagttaaaatgcttcctcagatgtac
tgccgtgcccgggacatggtctttagtgaacttgctggggttgtgaactgtggcgttact
acagatctttggcaaagccaaacccagaacaggtcgtacatttcgctctctgtgcattct
gtgaattacaacagtacaagtggcttctccatgaccaacaagtgtcttaaaaccttcgaa
gtacaagaggacaacacggcggagaacatcaccagagcaatgtatgaagcatttgtcgaa
tggggaataacccacaaggtcagcggtgccaccacaaacggttcagtggacatcatgaaa
gcatgctccctcctggagctgtcggtggaaatgccttgcctcggacataccgtcaatcgc
gcgatagctgaagccttccagctgccgcgcgtcgacagctttttgggatgttgccgcaaa
ctcatcgatcatttccgagaaccggcaatgtatctgctaagggataaacagaagcagcac
ggcctccctcagtgtgcgctcgtcacagaccgaggtagatcttggttggccacgttggca
atgttacagcgactgaaagagcaacaggttgttgtaactgcaacgctggtagagagttca
agcgctcatcgcttcagcttcgatggccctgactgggccttgttggagggcttgatttgc
gtcctccagcctttaaaagttgtggcaaacatgatcacctcttgcaggtacccaaccatt
agcatggttaggcccgtgcttcatatgctgctgaataccactcttaaagtcaaggaaggg
gacctcaaagagatcagcatgacgaaagaggtcatctcaaaggtcctgtcgagcacctat
tcgcagaacacacagctatcgcaagaaatttccacgttcctcaacattgcgaccttcttg
gatcctcggtacaagaagttgcctttcctgtccactcaggaacgctccaaaattgagagt
aacatcattgatgaggcaaaagcagtcattgagaagcagattgccgagcgaccttgccta
ggcgaattctccttgacatcagacgagccaccttgcaaaaagcagacgcccctacgagag
gcttcagccggcagtgccacccaagacaaccctttggctgccatatttcgtcagtccgat
gcagaccagagccaggaggagctgcatgcccaggtcgtagaggagctgagcaactacaaa
tcccaaagagtcctaggtctgaatgaagaccctctgctgtggtggtcgagtcatgcaccc
ttgttccccaccctccccaaggtgctccagaagtactggtgtgttcctgccactagtgtc
cctcctcacaggctgttcagttcctccgggacggtcctgtctgggaaaaggaaccgttta
gtcccagctttggtagatcagcaggtcttcttgtatgagaactcgcagagctactgtgag
cctgaactctgtgagaatgatttggacaatgaaggaagcggtaatctgggcaggcaactt
gagtga
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