Etheostoma cragini (Arkansas darter): 117939492
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Entry
117939492 CDS
T07493
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117939492 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117939492 (runx1)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
117939492 (runx1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
CD52
Motif
Other DBs
NCBI-GeneID:
117939492
NCBI-ProteinID:
XP_034720792
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Position
24:13546111..13583076
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AA seq
499 aa
AA seq
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MNAGAFSGSGPLSWAVYLMRKGRTAGALFDPAPGRRYTPPSTTLASGGKMAEALPLGAAQ
DNAGGGALLAGKLRLAERGMVEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKV
VALGDTPEGTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTIT
VFTNPPQVATYQRAIKITVDGPREPRRHRQKMDEVKPGSLAFSERLTELEQLRRGSMRVT
PPHHHHHQHSAHTRQSAALNSAPFSSPTHAQMTADSRQMQSSPSWSYDQSYPYLGQITTP
TVHTANPLSPGRSSLSDLSSRLSGPELTAFGDPRMTLERPFPSLPDSRFSDHRVHYPPTA
AAFTYTPPHNAVSSGALGITMATAMATTPAGRYHTYLPPPYPANTPHQAQSFQSTSSPYH
LYYSTAAGSYQFSMMAGGGSGDSRSPPRILPPCTNASTGSALLHPSLPNQNEVVGVEVES
SHSSSPTNMAAAEAVWRPY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctggggcgttctcgggctcgggccccctgtcctgggccgtgtacctgatgagg
aagggccggacggcgggcgcactctttgaccctgcccctggccggcggtacacgcccccc
tctaccacgctggcctcgggggggaagatggccgaagcgctgcctctgggcgccgcgcag
gacaacgccggtggcggggctttgttggcgggaaaactacgcctggctgagcgtggcatg
gtggaggtgatctcggaccatccaggcgagctggtgaagacggacagtcctaacttcttg
tgctccgtgctgccgacacactggaggtgcaacaagacgctgcccatcgccttcaaggtg
gttgccctaggcgacacacctgaaggaaccttggtaacagtgatggcgggaaatgatgag
aactactcagctgagctgcgcaacgccacggctgccatcaagaaccaagtggccagattc
aacgacctgcgctttgttggccgcagcggacgagggaagagtttcactctgaccatcaca
gtgttcaccaaccctcctcaggtggccacataccagagagccattaaaattactgtggac
ggtccaagagagccacgacgtcaccgtcagaagatggacgaagtcaaacctggctccctg
gctttctctgagcggttaacagaacttgaacagctgagacgcggctcgatgagggtgacg
ccccctcaccaccatcaccatcaacactctgcccacactcggcaatccgcagcgctgaac
tcagcccccttctccagcccgacacacgctcagatgactgccgactccagacagatgcag
tcttctccgtcttggtcctacgaccagtcgtatccctaccttggccagataaccacgccc
accgtccacacagccaatcccctctcgcctggtcgatcctcgctcagtgacctgtcctca
cgactctcaggtcctgagctcacagcgtttggcgacccgaggatgacattagaacgtcct
ttcccctccctgcctgactcgcgtttctccgaccaccgggtgcactaccctcccactgcg
gccgctttcacttacaccccacctcacaacgctgtctccagcggtgcccttggcattaca
atggcgacagccatggcaaccaccccggcagggaggtaccacacttacctgcctcctccg
tacccggcaaacacacctcaccaggcgcagagtttccagtccacatcctcgccataccac
ctgtactactccaccgcagccggctcctaccagttctccatgatggcggggggtggcagt
ggcgactcacgctccccgccaaggatcctgccaccctgcaccaatgcctccacaggctcc
gctctccttcacccctcgctgcccaatcagaacgaagtagttggtgtggaggtggagtcc
agccacagcagctcaccgaccaacatggccgcagctgaagctgtctggagaccatactaa
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