Etheostoma cragini (Arkansas darter): 117939524
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Entry
117939524 CDS
T07493
Symbol
tsku
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ecra00535
]
117939524 (tsku)
Proteoglycans [BR:
ecra00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
117939524 (tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_5
LRR_6
LRR_14
LRR_EndoS
LRR_LRWD1
LRRNT
LRR_NXF1-5
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
117939524
NCBI-ProteinID:
XP_034720847
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Position
3:complement(20752332..20762016)
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AA seq
379 aa
AA seq
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MLLKLNWVSSIQLSFTHRWTTATAMETHKKKSIMAFLLWLGLSLLTSVRSNAVKNCHHGC
RCEVESFGLFDSFSLTRVDCRGLGPATTMPIPIPLDTAHLDLSSNAMGPISDTMLAGPGY
TTLVSLDLSSNLITKVTPNALSKLRYLESLDLSHNNLESLSPSCFSSLPLAEVDLSHNSF
QEFNMDVFATKINGQPVSVDLSHNKLVSVSTTLQVLHIQSLNLSANRMLSIPRLAGLPLR
YLNLDGNPIKQIKEGAFAQLNDLGYLSISGLHELQEIEPYSFKGLQNLQVLDLSNNPKLK
TINPVVFSGLDSLQELNLSGSGVVSLPNNMLTHLASIKSITLGQNIHCWRTQKQGQFHRQ
LGQVQHNDVLNCNVEGIVL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaagttgaactgggtgagctctattcagctctcatttacacataggtggaca
acagcaacagctatggaaacacataaaaaaaagagcataatggcattccttctgtggctt
ggcctgtcgcttctgacctcagtccggtccaacgctgtcaagaactgccaccatggttgt
cgctgcgaggtggaaagtttcggcctgtttgacagcttcagcctgaccagggtggactgc
cgagggttgggacccgccaccaccatgcccatccccatcccactggacactgcccaccta
gacctgtcctccaacgccatgggcccgatcagtgacactatgttagctggtccaggctac
actacccttgtaagcttggacctcagcagcaaccttataacaaaggtaacacccaatgct
ttgtccaagctgcgttacctggagtctctggatctgagccacaacaacctggagagcctc
tccccaagctgcttctccagcctccctctggctgaagttgacctcagccacaacagcttc
caggagttcaacatggatgtgtttgccactaaaattaatggtcaacctgtcagcgtggat
ctgtctcataacaagcttgtttcagtctccacaactttgcaagtgttacacattcaaagc
ttaaatttgtcagcaaaccggatgttgagcataccgaggctggcaggacttcctctgcgg
tatctcaatctggatggtaaccccatcaaacagatcaaggagggagcttttgctcagctg
aatgatctgggttatttatccatcagtggcctccatgagcttcaggagattgagccgtac
agctttaagggccttcagaacctacaagttctggatctctcaaacaaccccaagctcaag
actataaaccctgtggttttcagcggactagactccctgcaagagctgaatttgtctggc
tctggtgtagtgtccttgccaaataacatgctgacccacctggccagtattaagagtatt
acactgggccaaaacatccactgctggaggacccagaaacagggtcagtttcaccggcag
ctgggtcaggtccaacacaacgacgtgctgaactgtaatgtagagggcatcgtgctgtga
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