Etheostoma cragini (Arkansas darter): 117939613
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Entry
117939613 CDS
T07493
Name
(RefSeq) calsyntenin-2-like
KO
K22660
calsyntenin 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117939613
Cell adhesion molecules [BR:
ecra04515
]
Cadherins
Cadherin related
117939613
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
Myc_N
V_ATPase_I
TLP-20
Astro_capsid_p
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
117939613
NCBI-ProteinID:
XP_034720965
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All DBs
Position
3:22908191..23125100
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AA seq
943 aa
AA seq
DB search
MLRLAGVLAVVALGLSAAHTKVNKHKPWIETSYHGVITENTDVVLLDPPLVALDKDAPIP
YAGEICAFNIHGLEAPFEAVVLNGTSGEGQLRASGLVDCEVQKEYTFIIQAHDCGSGPGG
TEGKKSHKAVVHIQVNDVNEFAPVFREPQYRAAVTEGKIYDSILQVEATDQDCSPQYSQI
CNYQITTTNTPFAIDRNGNIRNTEKLSYDRQQLYKIQVTTWDCGQKRALHSVPVHIDVKP
VCKPGWQDWSKRVDYEPGTGSKQLFPKMHLETCGGPLSSVRTTVELQTSHIGKGCDRETY
SEKSLQKLCGASSGSTDLLPAPSAATNWTASLVTDSGRDSDLIFRFDGHQAAKIPDWVVP
QNLTDQFTIATWMKHGPSPGLRAEKETLLCNSDKTEMNRHHYSLYVHNCRLVFLLRRDFT
QVDTFRPAEFHWKLEQICDKEWHYYVINVEFPVVTLYVDGVTYDPYLVTDDWPIHPSQID
VQLTVGACWQGGEVTKPRFTQYFRGSLSGLTIRPGKIESQKVISCLQACKEGLDINSLES
LDKSIKFHFNPAQSILVMEGEDLENMNAAVKKVSYINSRQFPTPGIRRLHISTAVQCFGE
DTCITIPDIDAVVMVLQPSEPRITITGVERLYHPASDLRAPGGTALFQDLHIISTVTRAD
ATAHHTEHRPGVLEEIIHNLDYCDVLVLGEELVPEQESLQLQRRALLGKHLDATNSTSGM
SIYGVDSMSNYEQVIRQVRYYNWRPGQLTERRFRLTCSELNGRYTSNEFNLEVSVLHSSE
AGERVNHMVAPPQYMQVVHHPSMIHDLYPSHSSAMPSAATVVIVMCIAALVVVVVLGIYR
VHLTHQQEVRLAETAKEADVTWDDSALTITVNPMENLEETQAVEEEASEEEDEEEEEEED
DEEEDDITSAESDDSEEEVDVQLPRMHRPNKKGQKWDKTTISY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgctgagactagccggcgtgttggctgtagtggctctggggttgagcgccgctcacacc
aaagtaaataaacacaaaccctggattgaaacatcataccatggggtgatcactgaaaac
actgacgttgttctgctagatcctcctctggtggccctggacaaagacgctcccatcccc
tacgcaggggagatctgtgcattcaacatccacgggctggaggctccgttcgaggcagtg
gtgctcaacggtacgtctggcgagggccagctgagggccagcggcttggtggattgcgag
gtgcagaaggaatacacctttatcatccaggctcatgactgcggatctggccccgggggc
acggagggcaaaaagtcccataaggctgtggtgcatattcaagtcaacgatgtgaatgag
tttgccccggtgtttcgggagcctcagtaccgagccgcggtgacggagggcaagatttat
gacagcatcctgcaggtggaggccactgaccaggactgctccccacagtacagccagatc
tgtaactaccagataaccaccaccaatacacccttcgccatagatcgcaacggtaacatc
cgtaacactgagaagctaagctacgaccggcagcagctgtacaagatccaggtcacgacc
tgggactgcggccagaagagagccttgcacagcgtccctgtccacattgacgtcaagcct
gtctgcaagcctggctggcaagattggagtaagcgagtggactatgagccaggaacagga
agtaagcagctgtttcctaaaatgcacctggagacctgtggcggaccactttcgtcagtg
aggaccacagtggagctacagaccagtcacattggaaaaggctgtgaccgcgagacctat
tctgagaaatctctacagaaactctgtggggcctcctcgggcagcactgaccttctgcct
gcccccagtgctgccaccaactggacagcttcccttgtgactgacagtggcagggacagt
gacttgatcttcaggtttgatggtcatcaggcagctaaaatcccagactgggtggtaccc
cagaatctgacagaccagttcaccatagcaacctggatgaagcatggacccagtcctggt
ctcagagccgagaaggagactctactctgtaactctgacaagaccgagatgaaccgtcat
cactattccctgtatgtccataactgccgcctggtgttcctgctgaggagagacttcacc
caggtggacaccttcagaccggctgagttccactggaaactggagcagatctgcgacaag
gagtggcattactacgtcatcaacgtggagttcccggtggtgacgctctatgtggacgga
gtaacctacgacccctacctggtgactgacgactggcccatccacccctcacagattgat
gtccagctcacagtcggtgcctgctggcaaggtggggaggtgaccaagcctcggttcacc
cagtacttccggggcagcctttctggattgaccatccgaccggggaaaatcgaaagtcag
aaagtcatttcctgtctgcaggcctgcaaagaaggactggacatcaactccctcgagagt
ctggataagagcataaagttccactttaacccagcacagtctatattggtaatggaggga
gaggacttggaaaacatgaatgctgctgtgaagaaagtttcctacataaactctcgtcag
tttcccacgccaggtatccgacgtctgcacatctccactgccgtccagtgttttggggaa
gacacttgtatcaccatcccagacattgatgcagtggtgatggtgttgcagcccagtgag
cccaggataaccatcactggagtggagagactgtatcatccagcctccgacctcagagcg
ccaggcggcacagctctgttccaggacctccacatcatcagcacggtcaccagggcagac
gccaccgcacaccacacagagcatcgacccggggtgctggaggagattattcataacttg
gactactgtgatgtcctggtcttgggagaggagctagtgccagagcaggagtctctccaa
ctacagcgccgcgctctgctcggaaaacacctcgacgccacgaactccacttctggcatg
tccatatatggtgtagactccatgtccaactatgaacaggtgatccgacaggtgcgttac
tataactggcgtcctggacaactaaccgagagaaggtttcgcctcacctgctcggagctc
aatggacgctacaccagcaatgagttcaacctcgaggtgagcgttctgcacagttcagaa
gcaggggaacgtgtcaatcacatggtagccccgcctcagtacatgcaggtggtccaccat
ccgtccatgattcatgacctgtaccccagccacagctcagcgatgccgagtgctgccacc
gtggtaattgtgatgtgtatagctgctctggtggtggttgtggtgctgggcatctatcgc
gtccatctgacccaccagcaggaggtcagactggcagagacagccaaagaggcagacgtg
acctgggatgactcggctctgacgatcacggtcaacccgatggagaacctggaggagacc
caggctgtagaggaggaggccagtgaggaggaggacgaagaagaagaggaggaggaagat
gatgaggaggaggatgacatcaccagcgctgagtcagacgacagcgaggaggaagtggac
gtccagctacccaggatgcaccgtccgaacaagaagggtcaaaagtgggacaaaacaacg
atatcttattga
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