Etheostoma cragini (Arkansas darter): 117939676
Help
Entry
117939676 CDS
T07493
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117939676
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117939676
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117939676
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117939676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
CEP104-like_TOG
TOR1L1_N
HEAT_EZ
Cnd1
Sec7-like_HUS
Adaptin_N
PDS5
HEAT_GCN1
HEAT_DAAF5
Paxt-1_C
KH_DEAH11_1st
Tail_completion_gp17
MMS19_C
Motif
Other DBs
NCBI-GeneID:
117939676
NCBI-ProteinID:
XP_034721055
LinkDB
All DBs
Position
24:complement(161301..223559)
Genome browser
AA seq
1535 aa
AA seq
DB search
METEVSMEYLLEQVMQKDLGKRLQVGQEIMELILDEEKSPDMERDQTLLDRMVDTVASSW
VNSSNFKVVLFGMDILSALVSRLQERFRTQVGTVLPSLIDRLGDAKDQVRDQDQALLLKI
MDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSPVS
DKNFEDEDSGDGGRSSSSSKGASLPGKKTVSMGSFRRPASASSTKSAGRDGSGAGAVDEE
DFIQAFEDVPTVQIYSNREVEDAMTKIRDVLSDDKRDWELRVAALKKVRSLLLAGAVEFD
GFPQQLRLMEAAFKLSAKDLRSQVVREACLTLSHLSLVLGSRFDHAAEAIMPTLLNLVPN
SAKVMATSGIATVRLILRHTHYPRLIPIITSNCSSKSVAVRRRCFEFLDLLQQEWQTSSL
ERHGTVLMETIKKGIHDADAEARSVARKCYWSFHGHFRREADQLFQGLEASYQKALQAHV
RTGDSLVSLPASDRSSSSSQESLNRPLSVKNTFGSGTTRSKASHTRPPAAASSPGSLQRS
RSDVDVNAAASATATARTRMPAVSSAMQPSAPPFSSASALPPGSYASLGRVRTRRTSSGT
GPSVTDTRGRSRGKVVSQSQPGSRSGSPGRLLSSTYGRIPRTTMGTAPPPTTTSTSSITS
TGLNDKSRPRGHRSHGCSRETSPTRSGTDRLSHQARISASVNAMKILNTGTDVEAAVADA
LLLGDSRSKRRPVRRRFESPGMYSDDDANSDASSACSERSYGSRNGGAAPHYLRQTEDVA
EVLNHCASANWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKRVFSMFL
ETLVDFVTLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFSYEQQFNI
LMRFIVDQTQTPNLKVKVAILRYIEALARQMDPGDFVNSSETRLAVSRVITWTTEPKSSD
VRKTLHSWAGEDLSGRPNTVASLPGEGNLEERCKQVEPPSDRMSRGRNLLLTLRNSPGAA
AHPQSGLKTKGDRGFGIRAPGALDQPARGDQASPGNSAGRTPPRPPSSRSSPLTSPTNCS
HGGLSPSMLEYDSENLNSEEIYSSLRGVTEAIQNFSFRSQEDLMEPLRRDGKRDAVSGVG
ASSELGGEVVGGGRTALDNKTSLLNTPSPRSFAGPRFRDYNPYNYTDSISTLDKAALKEA
LFEDAVEQLRDGSRQECVENKIVNPKSFPAVPAEQLQLVGELLKELSQGQAGDRGPEDRR
GTLLELLKVAREDSLVVWEEHFKTMLLLLLETLGDKDHTIRALALRVLKEILRNQPALFK
NYAELTIMKTLEAHKDMHKEVVRAAEEAASTLAASIHPEQCIKVLCPIVQTADYPINLAA
IKMQTRAIERIAKEPLHQLLSDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPY
LAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaggtgagcatggagtatttgctggagcaggtgatgcagaaggacctgggg
aagaggctccaggtgggccaggagatcatggagctcatcctggacgaggagaagtccccc
gacatggagcgggaccagaccctgctagacaggatggtggacacagtggccagctcctgg
gtcaactccagcaacttcaaggtggttttatttgggatggacatcctgtccgctctggtc
agccgactgcaggagagattcaggacgcaggtgggaacagtcctaccgagcctcatcgac
cggttaggagacgccaaggaccaagttcgagaccaggaccaagcgctgctgctgaagatt
atggaccaggctgctaacccacagtatgtgtgggagcgaatgatgggaggcttcaagcat
aagaacaacaggaccagagaaggactctgcctctgtctcatctccaccctcaatgtgttt
gggtctcagagtctgacgctcagtaaaattgttcctcacatctgtaacctcctcggagat
cccacaagtcaggtgcgtgacggagccatgaactgcctcgtggagatctaccgccacgtc
ggagaacgagtgagaatggacctgggaaagaagggtctgcctcagtcgcggctaaatgtc
atcttcagtaaatttgacgaagttcagaggtcagggaacatggtcctttcacctgtgtca
gataaaaactttgaggatgaagactcgggggacggcggccgctcctcgtcctcttccaaa
ggagcctcgctacctgggaagaagacggtgagcatgggttcatttcgacgccccgcctcc
gcctccagcaccaagtctgcagggagggacgggtctggtgctggagctgtggacgaagag
gacttcatccaggcctttgaggacgtccccacagtgcagatctactccaacagggaggtt
gaggatgccatgacgaagatccgagacgtgctgtcagacgataagagggactgggagctc
cgagtggcagctctgaagaaggtgcgttcgctgctcctggccggcgcggtggagtttgac
gggtttccgcagcagctccggctgatggaggcggcgttcaaactgtccgcaaaggacctc
cgctctcaggtggtccgagaggcgtgcctcactctcagccacctgtcgttggtgctgggc
agccggttcgaccacgcggcagaggccatcatgccgaccctcctcaacctggtccccaac
agtgccaaagtcatggctacctccggcatcgccaccgtccgcctcatcctccgacacaca
cactaccctcgccttatccccatcatcaccagcaactgttcctccaaatctgtggctgtg
agacggcgctgctttgagttcttggacctgctgcagcaggagtggcagacgagctctcta
gagagacatggaacagtgttgatggagacgataaagaaagggatccacgatgccgatgca
gaggctcgctctgtggccagaaagtgctactggagtttccacggccacttcaggcgggag
gcggatcagctgttccagggcctggaggcgtcctatcagaaggctctgcaggcccatgtg
aggaccggagacagcctggtgtcgctgcccgcctcggatcgctcctcctcctcctcccag
gagagcctcaatcgaccgctgtctgtaaaaaacacctttggaagcgggacaacaagatcc
aaagcctcccacaccaggcctcctgctgcagcctcttctcccggctccctgcagcgctct
cgcagcgacgtggacgtcaacgcggcggcctccgccaccgccaccgcccgcaccaggatg
cccgccgtgtcctccgccatgcagccgtcggctccacccttcagctcggcctcggccctc
ccccccgggtcctacgcttcgctgggtcgagtacgaaccagaagaacgagttcgggaacc
ggtccgtctgtgacagacacccggggaagaagccgagggaaagtggtctcgcagtctcaa
cccggcagtaggtcaggttctccgggccgcctgctaagctccacgtacggcaggatcccg
aggaccaccatgggcaccgcccccccccccaccaccaccagcaccagcagcatcacttcc
accggcctgaacgacaagagccggccccggggtcaccgtagccatggctgcagccgagag
accagccccaccagatcaggaacggaccgtctgtctcatcaggctcggatctcggcgtcc
gtcaacgccatgaaaatcctcaacaccggcaccgacgtggaggcggccgtcgcggacgct
ctgctcttaggagactcgaggagtaagcggaggccggtgaggcggcgcttcgagtctccg
gggatgtactcggacgacgacgccaacagcgacgcctccagcgcttgctccgagcgctcg
tacggctcgcgcaacggcggcgcggcgccgcactacctgcgtcagacggaggacgtggcc
gaggtgctgaaccactgcgccagcgccaactggtctgagaggaaggagggtctgctgggc
ctgcagaacctgctcaagagccagaggatgctcagtcgcgtggagttgaagaggctttgt
gagatcttcaccaggatgtttgcagatcctcacagcaagagagtcttcagcatgttcctg
gagactctggtggacttcgtcacgctgcacagggacgacctgcaggactggctcttcgtc
ctgctcacccagctgctgaagaagatgggcgccgacctgctgggctccgtccaggccaaa
gtccagaaggccctagacgtcaccagagattccttctcgtacgagcagcagttcaacatc
ctgatgcggttcatcgtggaccagacccagacccccaacctgaaggtgaaggtggccatc
ctgcgctacatcgaggctctcgcccgccagatggacccgggcgacttcgtcaactccagc
gagacgcggctcgccgtctctcgcgtcatcacctggaccaccgagcccaagagctccgac
gtccgcaagacccttcatagctgggcaggggaggatctctcaggccgacccaacaccgtg
gcctctctgcctggggagggcaacctggaggagaggtgcaagcaggtagaacctccatca
gaccgcatgagcagagggaggaaccttctcttaactctcagaaacagcccgggagcagct
gctcatccacagtctggactgaaaactaaaggggacagagggtttggtatcagggccccc
ggggctctggaccagcctgcccgaggagaccaggcgtctcccggtaactcggcgggtcgc
acccccccgcggccgcccagcagccgcagcagcccgctgacctcgcccaccaactgctcc
catgggggtctttctcccagcatgctggagtacgacagtgaaaacctgaactcggaggag
atctacagctctctccgcggcgtcaccgaggccatccagaacttcagcttccgcagccaa
gaggacctgatggagccgctgaggcgggacggcaagagggacgccgtgtccggagtcggg
gcgtcctcagagctcggcggtgaggtggtaggtggaggacgcacagccctggacaacaag
acatctctgctgaacacgccatcgccgcgctcctttgccggccctcgcttcagagactac
aacccgtacaactacacggacagcatcagcacactggacaaagctgccctgaaggaggcg
ctgtttgaggacgccgtggagcagctgcgggacggcagcagacaagaatgtgtggaaaac
aagatcgtgaaccccaaaagcttccctgccgtccctgccgagcagctgcagctggtcggg
gagctgctgaaggagctctcccagggccaggccggggaccggggccccgaggaccgacgg
gggactctgctggagctgctgaaagtggcccgagaggacagcctggtggtgtgggaggaa
cactttaagacaatgctgctgctgctgctcgagacgctgggggacaaagatcacacgatc
cgggcgctggccctgcgggtcctgaaggagatcctgaggaatcagccggccctctttaag
aactacgctgagcttaccatcatgaagacgctggaggctcataaggacatgcacaaggag
gtggtgcgtgcagcggaggaggcggcctccaccctggcggcctccatccacccggagcag
tgcatcaaggtcctctgtcccatcgtgcagactgcagactaccccatcaacctggccgcc
atcaagatgcaaacgagggccattgaacgcatcgccaaggagccgctgcatcagctgctc
tctgacatcatacctggactcctgcagggctacgacaacacggagagcagcgtgaggaag
gccagcgtcttctgcctggtggccatctactccgtgatcggagaggagctgaagccgtac
ctcgctcagctgaccggcagcaagatgaagctgctgaacctgtacatcaagagggcgcag
acctccaccagcaacagcagcagctcctccgacatctcgtcctactaa
DBGET
integrated database retrieval system
