Etheostoma cragini (Arkansas darter): 117939984
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Entry
117939984 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117939984
04131 Membrane trafficking [BR:
ecra04131
]
117939984
04121 Ubiquitin system [BR:
ecra04121
]
117939984
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117939984
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117939984
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117939984
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117939984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_2
Zap1_zf1
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117939984
NCBI-ProteinID:
XP_034721251
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MHCVHSLDPIMDQSADNDLQGSDGSGILGGPDVRRRIPIKLISKQPIRSKPPPRTQRPGG
RPCKSEAGVDDTFGFKQEERFDCGAKSGDVFATQRRFPQALFWDYKLNLIGERDEVPIHF
CDKCGLPIQLYGRMIPCKHVFCYDCALLHEKKGEKMCPGLTMYNCTDPVQRIEQSQRGAL
YMCSVVPGCKRTYLSQRDLQAHVNHRHMRAAKSSAGRQEPVHLPPASEVPDRFRVPPPHL
PKNHVHLPNPLQHGSHDPYGQPPPPTPHVEFLMVLSQAVPRVRRSGRGPILDPSVGKVLE
RFLKEPLAVAFLCGVSLCSDGLRVSPALRCELMF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgttcactcgttggatccgatcatggaccaaagcgcagacaatgatcttcaa
ggaagcgatggttctgggattttgggtggcccagatgtccgcagacgaatccccatcaag
ctcatatccaagcagcccataaggagcaaacctccgccccgcacccagagacccggcggc
aggccgtgtaaaagtgaggccggagtagacgatacctttggcttcaagcaggaggagagg
ttcgactgtggagctaaatctggggacgtgttcgcaactcagaggaggttcccccaggcg
ctgttctgggactacaagttaaatctgattggagaaagagatgaagtaccaatccacttc
tgtgataaatgtggtcttcctatccagctctacggacgcatgatcccctgcaaacacgtc
ttctgctacgactgtgctctgctccatgagaagaagggagagaagatgtgtcctggcctc
acgatgtacaactgcacggacccggtgcagcggatcgagcaaagccagcggggggccctc
tacatgtgcagcgttgtgccgggatgcaaacgcacctacctttcccagcgggacctgcag
gcccacgtcaaccaccgccacatgagggccgccaagtcctccgccggccgacaggagccc
gtgcacctgccccccgcgtccgaggtcccggaccgcttccgcgtgcctccgccccaccta
cccaagaaccacgtgcacctcccgaacccgctccagcacggcagtcacgacccctacggc
cagccgcccccgcccacaccccacgtggagtttctcatggtcctcagtcaagcggtcccc
agagtacgcaggtctggccgaggccccatcctggatcccagtgtgggaaaggttctggag
aggttccttaaagaacctttggccgttgctttcctgtgcggtgtgagcttgtgctctgat
ggtctcagggtgtcccctgctctcaggtgtgagcttatgttctga
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integrated database retrieval system
