Etheostoma cragini (Arkansas darter): 117940183
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Entry
117940183 CDS
T07493
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04330
Notch signaling pathway
ecra04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117940183
04371 Apelin signaling pathway
117940183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ecra04090
]
117940183
CD molecules [BR:
ecra04090
]
Proteins
117940183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
EGF_DL_JAG
hEGF
DSL
JAG1-like_EGF2
EGF_Teneurin
EGF_3
EGF_CA
EGF_2
cEGF
Motif
Other DBs
NCBI-GeneID:
117940183
NCBI-ProteinID:
XP_034721440
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Position
3:11522271..11569993
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AA seq
755 aa
AA seq
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MESTRAHRITLLDPRNGIGKIPGKLDMVGVRHRGHIHLQRTVIFFIALSIQSQGVSAVGK
FELQIHYFQNPLGLLQTGDCCDIQANGGQRCSARDQCDTYFQACLKEYQARVIPTGACTF
GSGSTGVLGGNSQLLHHRGHEGGGGGGEDGTNGHIVIPFKYAWPKSFSLVLEALDYDNDT
SESGQLIERVLLSSMLNPGEQWQTYRHHGRSLSLHYRLRFRCDSNYYGPFCNKFCRARDD
FFGHFNCDHSGSKVCMEGWTGPECKEAVCRQGCHQVHGSCTAPAECKCHYGWKGPLCDQC
VTFPGCVYGSCTEPWQCVCDVNWGGLLCDKDLNYCGTHQPCKNGGTCTNTEPNEYHCECQ
EGFRGRNCDIVEHACLSSPCVNGATCVEDPTGFSCTCTDGWTGHTCTDAARQCDRSPCGR
GATCQETPGGHRCLCPPGWTGRTCQLDTNECEMSICVHARSCRNLIGGYLCDCLPGWTGP
TCDIRNSSCQGLCLNGGRCEDQSSGSRCLCLPGFSGKYCQNDPSPCDSAPCLHGGQCVEK
DGGTVTCNCPTGYSGVFCEIVVDPCNPNPCQPGVACHSMEGRFMCACPEGYYGNKCIGIK
NPCIGQHCPDAMSDTTNGGVSFYIILVSVLALVMVCGCAACAFILSHLHRKRKKQQTIPQ
EEGINNQREFVNLIRNVDRPVPFLPPATPLAHPPAPPAPVSRCYEEIELTLPPSPAPSHP
SPALKPAHAPKLDISNREREKLNRFHYTDNQELEA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacaagagcgcacaggataactctgctcgatcctagaaacgggattggaaag
atccccgggaagcttgacatggtgggtgtcagacaccgaggacacatccacctgcagagg
actgtgatttttttcatcgcgctctcgatacaatcgcagggtgtgtctgcagttggcaag
ttcgagcttcagatccattacttccagaaccccctcggccttctgcagacgggagactgc
tgcgacatccaggccaacggggggcagcgctgctctgccagggaccaatgtgacacttac
ttccaagcctgcctcaaggagtaccaagcccgggtcatcccaactggagcctgcaccttc
gggtcgggcagcacaggggtcctgggtggaaactcccagttgctccaccaccggggacat
gaggggggaggaggaggcggagaggacgggactaatggacacattgtcattcccttcaaa
tacgcatggccaaagtccttctcactggtgttggaggctctggactacgacaacgacacg
tcagaatcaggtcagctgattgagcgagtcctcctctcttccatgttgaaccctggtgag
cagtggcagacgtaccgacatcatggacggtctcttagcctacattaccggcttcgcttc
cgctgtgattcaaactactacggacctttctgcaacaagttctgcagggcccgcgatgac
ttctttggtcactttaactgtgaccacagcggctcaaaggtctgcatggagggctggacg
gggccagagtgtaaagaagcggtgtgcaggcaggggtgtcatcaggtccacggctcctgc
acggcgcctgctgaatgcaagtgtcattatggctggaagggcccactgtgtgaccagtgt
gtgacgttccctggctgtgtgtacggaagctgcaccgagccctggcagtgtgtgtgcgac
gtcaactggggaggactactgtgtgacaaagatctgaactactgtggcacccaccagccc
tgtaagaacggtgggacctgcacaaacacagagccaaatgagtaccactgtgaatgccag
gaaggtttcagaggacgcaactgcgacatcgtggagcacgcgtgtttgtcgtccccgtgt
gtaaacggagccacctgtgtggaagacccaacgggcttcagctgcacctgtactgacggc
tggaccggacacacgtgcactgatgctgcgaggcagtgtgatcggagcccttgtggacgt
ggagctacatgtcaggagactcctggaggacaccggtgcctctgcccacctggatggacc
ggccggacgtgccagctggacaccaatgagtgtgaaatgagtatatgcgtccacgcccgc
tcttgtcgcaacctgatcgggggatacttgtgtgactgccttcctggatggacggggcct
acctgtgacatccggaacagcagctgtcagggtttgtgtctgaatggtggtcgttgtgag
gaccagtcatcaggttccagatgtttgtgtctacctggtttctcggggaaatattgccaa
aatgatccaagtccttgtgacagcgctccgtgtctgcatgggggacagtgtgtggagaag
gatggagggaccgtcacctgcaactgtcccacgggatattcaggagtcttctgtgagatt
gtggtggatccttgcaatcctaacccctgccagccgggggttgcatgtcatagcatggaa
ggcagatttatgtgtgcatgtcccgagggttactacggtaacaagtgcattggcataaag
aatccatgcattggtcaacactgtccagatgccatgtccgacacgactaacgggggtgtc
agcttctacattatcctggtgagcgtcttagctttggtgatggtctgtggctgtgctgcc
tgtgccttcatcctctcccacctccatcgaaagcggaaaaagcagcagaccatcccacag
gaagaaggcatcaacaaccagagggagtttgtaaacctcatcagaaacgtggaccgtcct
gtgcccttcctgccccccgccaccccgctcgcacaccctcctgcccctcctgctcccgtc
tcacgttgctacgaggagattgaactgactctgccgccctcccctgcaccttcacacccg
tctccagcactaaagccagcccacgcccccaaactggacatttcaaaccgcgagagggag
aagttgaaccgctttcactacacagacaaccaggagctggaggcctga
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