Etheostoma cragini (Arkansas darter): 117940325
Help
Entry
117940325 CDS
T07493
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04136
Autophagy - other
ecra04140
Autophagy - animal
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117940325
04136 Autophagy - other
117940325
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117940325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117940325
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117940325
Membrane trafficking [BR:
ecra04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117940325
Others
Specific organelles associated proteins
Auto phagosome
117940325
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117940325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_SPT8
PUMA_CC
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
Beta-prop_HPS5
Crescentin
FUSC
HEF_HK
Phage_GPO
Fez1
MCM_N
DUF6267
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
117940325
NCBI-ProteinID:
XP_034721538
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MAERQVDFTWKRHISEQLKLRDRVQRQAFEEIIHQYNRLLEKSDLQAVLSERYQTDKYEV
QRGPETRFFLQLAQSVIELNNQIQMKDKEIQSNEAKMVEYQQQMTSLEVDCRELRNFLQD
LEKANQTLKDEYDALQITFSALEEKLRKTTEDNQELVSRWMAEKAQEANKLNAENEKDSR
XTPPRPTAPLYNNPXFIAFWLISAASSRLRVCSVDDDIEVLAEEGGKGGGETSPSRAVRT
PSKKTSQPPPAGLLDSISNIFGVSECVDPGLVSAPCRRRPGNAFSTSPENTEAPSGVCAE
VRVPSTALHVFDAHDGEVNAVRFSPSSRLLATGGMDRRVKLWEVVAGRCEPKGALTGSNA
GITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGS
YDRTLKLWDLRSKVCMKTVLTLGVLHMLSVTLGVLDGSRHAQCD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgacaggtggactttacctggaagagacacatctcggagcagctgaagctc
agagatcgagttcagagacaggccttcgaggagatcatccaccagtacaaccgtctgctg
gagaagtctgacctgcaggctgtcctatcggagagataccaaacggacaagtatgaggtc
cagaggggccccgagaccaggtttttcctgcagctcgctcagagtgtgatcgaactgaac
aaccagattcagatgaaggacaaagagatccagagcaatgaggccaagatggtggagtac
cagcagcagatgaccagtctggaggtagactgtcgggagctgaggaacttcctgcaggac
ctggagaaagccaatcagacgctgaaggacgagtatgacgcgctgcagatcaccttctcc
gctcttgaggagaagctgcggaaaacgaccgaggacaaccaggagctggtgtcccgctgg
atggccgagaaggctcaggaggccaacaagctgaacgcggagaacgagaaggacagcagg
tagacccccccacggccaacagcccccctttataataatccataattcatcgcgttttgg
ctcatttctgccgctagctcgcggctccgtgtctgctctgtagacgacgacattgaggtt
ttggcggaggaaggaggaaaaggaggcggagaaacgtcacccagcagagcagtcaggact
ccaagtaagaagacctctcagcctcctccggccggtctgctggactccatctccaacata
ttcggagtgtctgagtgtgttgatcctggactggtctcagctccctgcaggcgtcgccct
ggaaacgctttcagcacatcgcctgagaacactgaagctccttcgggagtgtgtgccgag
gtccgagtcccgtccacggctctgcacgtctttgatgcccatgacggcgaggtgaacgcc
gtgcggttcagccccagctctcgtctcctagcaacaggagggatggaccggcgggtgaag
ctgtgggaggtggttgccggtcgctgcgagccgaaaggcgctctgaccggcagcaacgct
ggaatcaccagcatcgagttcgacagcgctggttcgtacctgctggcggcctccaatgac
tttgccagtcggatctggaccgtagacgactacagactgaggcatacgttgacaggtcac
agtgggaaggtgctgtctgctcgcttcctattggacaacgctcgaatcgtctccggcagc
tacgaccgaacgctcaaactctgggacctgcgcagcaaagtctgtatgaagacggtgttg
actctgggggttctgcacatgctcagtgtgactctgggggttcttgacggttctagacat
gctcagtgtgattag
DBGET
integrated database retrieval system
