Etheostoma cragini (Arkansas darter): 117940473
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Entry
117940473 CDS
T07493
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117940473 (vps53)
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Others
EARP complex
117940473 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
117940473 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
Syndetin_C
FBF1
Laminin_II
VPS51_Exo84_N
Sec8_N
Motif
Other DBs
NCBI-GeneID:
117940473
NCBI-ProteinID:
XP_034721639
LinkDB
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Position
3:complement(14818042..14844781)
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AA seq
830 aa
AA seq
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MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHGKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFDESFPSQGSKRTVGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDTPGQKRPESPLETTNPFLEDEAGEDTGTDKDQDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKEGSEA
AKFTMDELCLICSILSTAEYCLATTQQLEEKLKEKVDKLLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGPDGGSSLFSTPTPEQESSRIRRLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaatttgaatttgctgaggatttggaggctattttgcatttaact
ccagaggtgcaactagccatcgaacaggtgttccccagccaagacccgctggacagagca
gacttcaacgctgtggaatacatcaacacgctgtttcccaccgagcagtctttggctaat
attgatgatgtggttaacaagattcgtctgaagatccggcgcctggatgacaacatcagg
acagtggtgagaggccagaccaatgtgggccaggatggcagacaggctttagaagaggcc
cagatagccatccagcagctatttggcaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtgaaggagattacaagggacataaagcaactggaccatgggaagcgc
cacctaactacatccatcaccaccctcaaccacctgcatatgttggcggggggtgttgac
tctttagaagccatgaccagaaagaggcagtatggtgaggtggccaacctgcttcaggga
gtggtcaatgtgctcgaacatttccacaagtacatgggcattccccagatcagacagctt
tctgagagagtcaaggcagcgcagagtgagctggggactcagatcctggcagattttgac
gaatccttcccctctcaaggctccaagagaactgttggtcccagtaacgtgcttagagat
gcctgcctggtggccaacgtgctggatccgcgcatcaaacaggagatcataaaaaagttc
atcagacagcacctctcagagtacctggtattattccaggaaaaccaagatgtggcatgg
ctagacaagatcgatcgccgctatgcctggatcaaacggcagctggtcgactacgaggag
aagtatgggcgcatgtttcctgaggagtggtgcatgacagagcgtattgctgtggagttc
tgccacatcaccagggtggagctagccaaagtgatgcgaacacgggctaaggagattgag
gtgaagctgcttctgtttgctattcagaggaccacaaacttcgagggtcttctggccaaa
cgcttcacaggatgcaccttgactgacacacctggacaaaagaggccagagagccctctc
gagaccactaaccccttcctggaggatgaggcaggtgaggacacgggcacagataaagac
caggatctggctaagcccaggaagccaaaagctccggacaaccctttccatggcattgtc
tccaagtgctttgaacctcatctatacgtctacatagaatcccaagacaagaacctgggc
gaactgatcgatcggtttgttgctgacttccgagctcaaggcccgcccaaggcaggcacg
gaggagggcggagcggtgctgcccagctgtgctgacctctttgtctattacaagaagtgc
atggtgcagtgctcccaactgagcaccggagagccaatgatcgccctcacaaccatcttc
cagaaattcctaagagaatacgcttggaagatcctctctggcaacttacccaaatccagc
agtaatagtgggggtcttaccatcagcagtctgctgaaagagaaagaaggctcagaagct
gctaaattcaccatggatgagctctgcctgatctgtagcatcctcagcactgcagagtac
tgcctggctaccacacaacagttggaagagaaactaaaggaaaaggtggataaactcctc
atggagagaataaatttgactggggagatggatacattcagcactgtgatctcaaacagt
atccagctacttgttcaagatcttgatgctgcctgtgaccctgctctcaccgccatgagc
aagatgccgtggcagagtgtggagcacgttggcgaccagagtccttatgtgacgtcaatc
atcatgcacattaagcaaaatgtgccgatcatcagagacaatctggcgtccacgcggaaa
tactttacacaattctgcatcaagttcacaaattctttcattcccaaatttatcaaccac
ctgttcagatgtaagcctatcagcatggtgggagctgaacagctcctccttgacactcac
tccctgaagacagtcttgctggatctgccctcaataggctcccaggtgctccgtaaggca
cccgccagctacaccaagatagttgtgaagggcatgacacgtgcagagatgatccttaag
gtggtgatggccccacatgaaccaccagtggtgtttgttgataactatatcaagctcctg
gctgatggaaatcctgagaccttccagaagattctggacatgaagggtctgaagcgcagt
gaacagagcagcatgttggagctcttcaggcagaggctacccactccgccgtccgggccc
gacggcggctcctctctctttagtacgcctaccccggagcaggagtcctctcgcatccgc
agactagagaaactcatcaagaagagactgtga
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