Etheostoma cragini (Arkansas darter): 117941056
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Entry
117941056 CDS
T07493
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117941056 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ecra04091
]
117941056 (frem2b)
Lectins [BR:
ecra04091
]
C-Type lectins
Lecticans
117941056 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
LAX
DUF6522
Motif
Other DBs
NCBI-GeneID:
117941056
NCBI-ProteinID:
XP_034722044
LinkDB
All DBs
Position
3:complement(4517957..4579638)
Genome browser
AA seq
3113 aa
AA seq
DB search
MAWIIPPHLHGTGAAFVLLVVILTGDAVAQVFDSYGLSYALRSELSEDTILVANNGIRVP
FGRSVFIDPINDLVIQVQPGDRCSITVLDNDPLSQRPGHLSPKKFPCEFGPNDVKYSHFG
SRSPPRDRVRLQLRYDTQTDTIIIPFMMEVEVIFTQLEVLTKNMPLTVEKLLGTSNPIDR
KILEFTFDNSVHQCKIASLSSGSVLPRYGKLVDGNRLGTMVDCDEFIKMNIRYQHTFALK
SPNRDYIPMLVELHDKEGNMLKQEFFQILVRIKDGVENTAPKPSFVAMMMMEVDQFVMTA
LTMDMLAAEDVESNPDELIFNITSTLSFEEGYIVSTDDRNLPITSFYQGDLKDLKIAYKP
PAVDSDTERIFQIEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSQNLEVSDEDSLDKVKITVIDGLRHGELTVLGLRRTFFTPADLDAGAVSYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEPPIINANTGLVLFKNQMMLISSLMLSAADID
SEDSAIKFTIELPFSTIGQVLLRQSEAPEDPSTWKFNTEDELYEKAVTEWLQQDITDGKL
FYKHIGPHSVSTVMDQFVFRVQDDNDPPNQSGESSFIIKILPVDDVPPELYPGTTLQMTV
HEYQLTYLRKKFLRYTDLDSEDRDLKYTVIQPPTDTDENNPVVLGALVLSEKSNTEVTVF
TQAQINHHKIAYKPPDLELGITTHVLQFRYTVEDVSGNIVEGVFTIFLKPVDNKPPQITN
SGFTVLERGRHIITRAELDTSDTDTDNKQISFTITQPPLHGQIQFTFTDMTRGDTFSLAD
IGNDRMSYIHNGDESTVDSIQIDVSDGVHVVPITIKITVKPIDDETPTISLPAGTIGSYI
DVLENGATEITSNVIQGRDEDTDDLRLTFIVEDPPSLGDILVKGVPSGTFTQADVINGFV
VYAHTSGEIGLTTQEDFFNLTLTDMSDEWTVGGNKITGVRVHVTILPLDSQAPEVFVGPQ
FTVIEGEKNVIQILHISADDADTSNDDLLCTIIVQPTAGYLENISPAPGSEKSRSGTAIS
ALTIKDIRQNHINYVQSIHRGVEPVEDRFTFRCSDGINFSERHFFPISIIPSNDEKPEIY
MREFVVIEGMNIVIDTPILNGADADLPSDQLTFIITKPPKHGFILNQLTTGTIPVSNFTL
DQIREASSIVYEHDDSETTEDSFDIVLTDGKFSVEKTVIVMIIPVDDETPRMAINDGLEI
EIGDVKVINSDVLKATDLDSEDDTLTYIIRYGPGQGYLQRATPSGTLQNITVEMNFTQSE
VDQGLIVYTHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVINKGVSLKEG
GRVTLTTDLLSTSDLNSPDEHLVFTITRAPTRGHLECTDTPGMPISSFTQLQLAGSKVYY
IHTSDDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVLTIHGLVVTEGENKLITPF
ELTAEDRDTIDRLLKFTVTQIPVHGRLLFNNSRPVTSFTKQDLNENMISYKHDGTESAED
SFSFTVTDGTHTDFYIFPDTVFETRKPQMMKIKVLPVDNGVPQIVMNKGAPTLRVLETGH
LGFVITSKTLKAEDRDSIQNSVTFRITGAPEHGYLINLGKGNATITTFTQAEIDDMNICY
VLRDGDNATNDIFYFSIEDSGGNKLKNQQFRLNWAWISLEKQHYVVDEEVKFLEVVLKRR
GYLGETSFISIGTKDGTAEKDKDFQGKSQKQVQFNPGQTKATWKVRILSDSEYEVSETFQ
IVLSEPVMAALEFPQLATVEILDPDDESTVFIPSAAYNIEEDIGELLVPVHRRGDASQEL
MVVCYTQQVSATGTVPTTVLSYSDYISRPEDHRSILRFDKGEVEKSCRVVIIDDSLYEDE
ESFNVTLSMPMGGRLGSEFPAARITIIPDMEDAPVFYFGNTDHHVDESDGFVEVQVWRTG
TDLSKGGTVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDLGQPVLEG
PEKFELVLRMPMNGILGEPSKTTILINDSVSDLPKVQFRDAVYVGDENAGQISATVYRSG
DISYKSTVRCYSRQGTAQVMMDFNERPNTDGSTITFLPGEIEKPCVLVLVDDTEHEEEEE
LRLVLGNPKSESPFGASIGRQNETLIKIKDNADKAIIRFGEAKFSVNEPKTSGQVSVVKI
PVLRVGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFNEGDTEHYVHVEILYDSVREMR
EAFTVHLKPDENMVAETKMSKAIIYIEETNSMADVTFPSVPIVVSLLHYDDIDRTANSLP
VAGYPVICVTACNPKYPDYDKTGSICVSENINNTLTRYRWLVSAPTGPDGVTSPMREVDF
NTFFTSSKLITLDSVYFQAGSRVQCAARGVNTNGDEGLELSSPIVSISMDEGMCQPRVAG
TVGAEPFSAKLRYTGTEDTDHPNLIKLTVTMPHIDGMLPVVSTRALSNFELTLSPDGTRV
GNHRCSNLLDYTEVKTRNGFLTEATKNPEVIGEAASYQYSTSLRGSSTLRFYRNLNLEAC
LWEFTSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQHFD
LQSELRLTFVYDTAILWRDGIGSPPEAELQGAMYPTSMRINGQGRLVVNFRTEARFRGLF
VFAHAASPLTSMVMCPDHPGLTFNLSLVRNEPTYNQPIQQWTFVSDFAVRDYSGTYTVKL
IPCTSPPSLEYTIPPVCNPREPLTFDMDIRFQQVSDPVAAEFSLNTQMILLSKRMLWLSD
GSMGFGQESDTAFSQGDTIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPSNF
EFGCLADAPSLLYRFKIIDKAQPETQARSFGSVAFNAFLAVDDPGALALARQPGSDGFRI
DSSALFQVSAGREWYIHTIYTVRSRDNANRGIGKRSLEYHVMSQHSDLLPKGQHRSRRSA
NDVPDIIEDIGLSNNRGTNMLHIALDRSSQQRTSPEREIFTRGVHPRELNQRESGDDGLV
LIIGVFVGLLLTVLVVIVVVLLVRSKREKKGVPESSISAEPMVTQTLSDSSEV
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattattcccccgcatttgcacgggactggcgcagcttttgttctgcttgtg
gtgattctgacaggtgatgcggtcgcgcaggtctttgacagctatggattatcgtacgcc
ttgaggtccgagctgtcagaggacacgatattggtcgccaataatgggatccgcgtgcct
ttcgggagatcagtcttcattgatcccatcaacgatttggttatccaagttcagcccggc
gatagatgcagcataacggtcctggacaacgaccccttgtctcaaaggcctggacacctg
tctccgaaaaagtttccgtgtgaatttggccccaacgatgtgaagtattctcactttggc
tccaggagtcctccgagggacagagtgagattacaactcaggtacgacacccaaacggat
accattatcatcccgtttatgatggaggtggaagtcatcttcacacagctcgaagtgttg
accaaaaacatgccactcactgtggagaagctgctcggcacaagtaaccccatcgataga
aagattttagaattcacctttgataacagcgtgcatcaatgcaaaatcgcctctctctcc
agtggcagcgtgctgcccaggtatgggaaacttgtagatgggaaccgcctcggaacaatg
gtggactgtgatgagtttattaaaatgaatatccgctatcagcacacttttgctttgaag
tcaccaaaccgagattacattccaatgcttgtggagttgcatgataaggaaggcaatatg
ctcaagcaggagtttttccaaattctagtgaggattaaagatggagtggagaacacagct
cccaaacccagctttgttgcaatgatgatgatggaagtagaccagtttgtaatgacagcc
ctaaccatggacatgctggctgcagaggatgttgagtctaatcctgacgaattaattttc
aatatcacatccactctatcctttgaggagggctacatagtgagcacggatgataggaat
ttaccaataacctcattttaccaaggagacctcaaagacttgaaaatcgcctacaaaccc
cctgctgtggattcagacactgagcggattttccagattgaatttgaggttgtggacaca
gagggggctgtgtcagacccttttgctttcatgattgttgttaagcctatgaacactttg
gcccctgtggtgactaggaatactggccagctgctgtacgagggtcagtccaggcctctg
tccagctcacagaatctggaggtcagcgacgaggacagtttagacaaagtcaaaatcact
gttattgatgggctgaggcatggagaattaactgttctgggtttgaggaggacatttttc
accccggctgacctcgacgccggagctgtcagttatcaacacgatggcagcgacacatac
agtgataatattattttccgaatgacagatggcacgaatgaggtggagtttctgtttccc
atcactgttgtgccaactgacgacgagcctcccattatcaacgccaacactggtttggtt
ttattcaaaaaccaaatgatgctcatctcctcactcatgctcagtgcagcagacatcgac
tcagaggattctgcaataaaattcacaatagagcttccattttccacgattgggcaggtg
ttactgcgtcagtctgaggccccagaggacccatcaacctggaagtttaatacagaggat
gaattgtatgagaaagcagtgactgaatggctgcagcaggatattacagatggaaaactg
ttttacaagcacattgggcctcacagcgtcagcactgtcatggatcagtttgtgtttcga
gttcaggatgacaatgacccaccaaaccaatcaggtgaaagctcgttcattatcaaaatt
ctgcctgttgacgacgtccctcctgaactgtaccctggcacgactctgcaaatgactgtg
cacgagtatcagcttacgtacctccgaaagaaattcctccgttacactgacctggactca
gaggatcgggatctcaagtacacagtcattcagccaccgacggatacagatgagaataac
cccgttgtattgggagctctggtattaagtgaaaagtcaaacactgaagtcacagttttc
actcaggcacaaattaaccaccataaaatagcttacaaacctcctgatctagagctcgga
attaccactcacgttttgcagttccggtacactgtggaggatgtttctggaaatattgta
gaaggagtatttactatatttttaaagcctgtagacaacaagccgcctcaaataaccaat
tctggatttactgtccttgaacggggaagacacatcatcacaagagctgagctggacacc
tcagacacagacacagacaacaaacagatatccttcactattacccagcctccgctgcat
ggccagatccagttcacattcactgacatgacaagaggagacactttcagcctcgcggat
attggaaacgacagaatgtcatacatccataacggagatgaatcaacggtggattcgata
caaatagatgtcagcgatggcgtccatgttgtcccaattactataaagattacagtgaag
ccaattgatgatgagactccaactatcagtctcccagctggcacaattggctcctacata
gacgtactggaaaatggagcaacagaaatcacaagtaatgtcattcagggaagggatgag
gacacggatgacctccgattgacattcattgtggaggacccaccatcattgggtgacatt
ctggtgaaaggtgtcccatctggcacattcacccaagctgatgtcattaacggctttgtg
gtctacgctcataccagcggggagataggtttgaccacacaggaggatttttttaatctc
acattgacggacatgtctgatgagtggactgtagggggaaataagatcacaggtgtcaga
gtgcatgtaactattcttcccctggacagccaagctccagaggtctttgtggggcctcag
ttcactgttattgagggagagaagaatgtcattcaaattcttcatataagcgctgatgat
gcagacacctccaacgatgacctcctttgtacaatcattgtacagccgactgcagggtac
ttggaaaatatctcccctgccccaggctcagagaaatccaggtccggtacagctattagc
gctttgaccattaaagacatcagacagaatcacattaactatgttcaaagcattcacaga
ggagtcgagccagtggaggacaggtttacattcagatgctctgatggcatcaatttctct
gaaaggcactttttccctatctccataatcccctctaatgatgaaaagcccgagatttac
atgagagagtttgtagttatagagggcatgaacatagtcatagacactcccattttgaat
ggcgctgatgcagatctcccctctgatcagctcacattcattattaccaaaccccccaag
cacggatttattctcaatcagctcactaccggcactatccccgtctcaaacttcaccttg
gatcagatcagagaggcctccagcattgtttatgagcacgatgactcagagaccacagag
gacagctttgatattgttctcaccgacggaaagttcagtgtagagaaaaccgtaatagtt
atgattatccctgtggacgacgagaccccgaggatggcaatcaatgacggccttgaaatt
gagataggcgacgtgaaagtcataaacagcgacgttttaaaagccacggatctggactct
gaggatgacacgctaacttatattatccgctacgggcctggtcagggatatttacagagg
gcaacaccgtctgggactttacaaaacatcacagtggaaatgaactttacacaaagcgaa
gtggatcagggtttgattgtgtacacccataacggacaagaggggattcgagacctcatc
aaatttgatgtgacagatggcatcaaccctttgattgacagatacttctacgtgacagtg
ggtggcatcgacatggttttcccagacgtgatcaataaaggtgtctcccttaaagagggt
ggcagggttactctgacaacagacctgctcagcaccagcgacctcaacagcccagacgag
cacttggtttttacaatcaccagagctcccacgagaggacacctggagtgcacagacaca
cctgggatgcccatctcatccttcacacagctccagctggctggcagcaaagtctactac
atccacacttccgatgacgaagtgaaaatggatagctttgaattcgaagtgactgacggc
tacaaccccgtgttccgcactttccgcatctccatcacggatgtggacaacaaaaaacct
gtgttgacaatacacggcctggtggtaacagaaggagagaacaaactcatcacgcctttt
gagctaacagcggaggacagagacaccattgaccgcctcttaaagttcacagtcactcag
atcccagttcatggtcgcctgctctttaacaacagccggcctgtcacctccttcacaaag
caggacctaaatgagaacatgatcagttacaagcatgatggcacagagagtgcagaggac
agcttctccttcaccgtcactgacggcactcacacggacttctacatcttccccgataca
gtatttgagacccgaaagccacaaatgatgaagattaaagtcctcccggtggataatggg
gtgccccagattgtgatgaacaagggggccccaacattgcgggttctagagactggtcac
ctggggtttgtgatcaccagtaagacccttaaagcagaggacagagacagcattcagaat
tctgtgacctttaggatcactggtgccccagaacatggctacctgatcaacctcggcaaa
ggaaacgccactatcaccaccttcacacaagctgaaattgacgacatgaatatatgctat
gttctgagggacggcgacaatgctacaaatgacatcttctatttctccattgaggacagt
ggaggcaacaaactaaagaaccagcagttccgtctgaactgggcttggatctccttggag
aagcaacactacgtggtggacgaggaggtcaagttcctggaggtggtgctgaaacggcga
ggctaccttggggagacctccttcattagtataggcacaaaggatggcactgcagaaaag
gacaaagatttccaggggaaatcacagaagcaggtgcagttcaacccgggccagaccaag
gccacctggaaggtccggatcttgtcagatagcgagtatgaagtgtccgagaccttccag
attgttctttctgaaccggtgatggcagccctggaattcccacagttggccactgtggag
atcctagaccccgacgatgagtcaacagtgttcataccctcagctgcatataacatagaa
gaggacattggggagctgcttgtcccggtgcacaggagaggagatgccagtcaggagctc
atggtcgtctgctacactcagcaagtttcggccacaggcacggtccccaccacggtgctg
tcctactctgattacatctccaggcctgaggaccaccgcagcatcctgcgctttgacaag
ggagaggtggagaaatcctgccgggttgtgatcattgacgactccctgtatgaagacgag
gaaagcttcaatgtcaccctcagcatgcccatggggggccgtctgggctcagagttccct
gcagctagaatcacaatcattcctgacatggaagacgctcccgtcttctactttggcaac
actgaccaccacgtggatgagagtgatggcttcgtggaggtgcaggtatggaggacgggg
accgatctttccaaaggtggaaccgtcacagtgcgatccagaaagacagatcccgtctcg
gctgaggctggtgtggattacgttgggatcagtcggaatctggactttgcaccgggggtc
accatgcagacgtttcgtgtgaccatcctggatgacctgggccagccggtgctggagggg
ccagagaagtttgaactggtactccggatgcccatgaatgggatcctcggggagccgagc
aagactaccatcctcatcaatgactccgtttcagacttgccaaaggtgcaattccgtgat
gctgtgtatgtgggcgatgagaacgccgggcagatctcagctactgtatatcgtagtgga
gatatcagctacaagtccacagtacgctgttacagtcggcaggggacagcccaggtcatg
atggacttcaatgaaaggcccaacacagatggttctaccatcaccttcttaccaggagag
attgaaaagccttgtgtactggtactagttgatgacacagaacatgaggaagaagaagag
ctccgtcttgtgttgggaaaccccaagagtgagtctccttttggagcatctattggaagg
cagaatgaaacgctcatcaagataaaagacaatgcagacaaggcgattattagatttgga
gaggccaaattcagtgtgaacgaaccgaaaaccagcggccaggtgtcggtggtgaagatc
ccagtgctgcgtgttggagacacctccaaggtctctgttgtccgagttcacaccaaggac
ggatctgccacctctggggaggactaccatcccatatctgaggaaattgttttcaatgag
ggtgacacagagcactatgtgcatgtggagattttatacgacagtgtcagagaaatgagg
gaggcgttcactgtgcacctgaagcctgatgaaaacatggtggcagagacaaagatgagc
aaagccataatctacatcgaggagaccaacagcatggcggatgtcaccttcccctcggtg
cccatagtggtgtctctgctgcactacgatgacatcgacaggactgccaactctctccct
gttgccggataccctgtcatctgtgtcactgcctgtaaccccaagtacccagactatgac
aaaacaggctccatctgtgtaagcgagaatatcaacaacactctgactcgttaccgatgg
ctcgtcagcgcccccaccggccccgatggcgtcactagcccaatgagggaagtcgacttt
aataccttcttcacctcctccaagctcattactctggattcagtctactttcaggctggc
tctagggtccagtgtgccgccaggggcgtgaacactaatggggatgagggtctggagctc
agtagccctatagtgtccatcagcatggacgagggaatgtgccagcctcgtgttgcaggc
acagtgggggctgagcccttctctgccaagctgcgctacactggaacagaagacacagat
caccccaacctcatcaaactaaccgtcaccatgccccacattgatggtatgttgcctgta
gtgtccacccgagccctgtccaacttcgagctcacgctgagccccgacggcacccgtgtt
ggcaaccatcgttgctccaatttgttggactacaccgaggtcaagactcgcaacggcttc
ctcactgaagccaccaaaaatccggaagtgatcggtgaggcagcctcttaccaatacagc
acttccctcaggggatccagtacactacggttctacagaaatctcaacttggaggcgtgt
ttatgggaatttaccagctactacgacatgtctgagctgctcagtgactgtggaggcacc
atcgggactgatgggcaggtgttgaatctggtccagtcctatgtgaccctacgagtcccg
ctccacgtgtcctatgtcttccactcccctgtgggagcaggaggatggcagcactttgac
ttgcagtcggagctgaggctcacttttgtgtacgacactgccatcttatggagggacggt
atcggtagcccaccagaggctgagctacaaggtgctatgtacccaaccagcatgcgtata
aatggccagggacgactagtagtcaacttccgcactgaggctcgattcagaggcctgttt
gtgtttgctcatgcagcttcaccactcacctccatggtcatgtgtccagaccaccctggg
ttgacctttaacctcagtctcgtgaggaatgagccaacctacaaccagcccatccagcag
tggacatttgtctcagattttgctgtgcgggactactctggcacgtacacagtgaagctg
atcccctgcacatcccctcccagcctggagtacaccatccctcctgtctgcaaccccaga
gagcctcttaccttcgacatggacatccgctttcagcaggttagcgaccccgtggcggct
gagttcagtctgaacacgcagatgatcttactctcgaagcggatgctctggctgtcagac
ggctccatgggcttcggacaggagagcgatactgccttctcacagggggatacaatttac
ggcagagtgatggtggatccagtgcagaacttgggcgactcctttatttgtaacatagag
aaagtgtttctgtgtactggagctgatggatatgtccctaaatacaaccccagcaacttt
gagtttggctgtctggcggatgctccatcactactctacagattcaagataattgacaaa
gcccagccagagacccaggcccgatcatttggcagtgtagctttcaacgccttcctggcg
gtggatgaccccggcgcgttagcactagcgagacaacccgggtcagatgggttcagaatt
gattcctcagctctcttccaggtttctgcagggagagagtggtacattcacaccatctac
actgtccgttctcgagacaacgctaaccgtggcatagggaagagaagcctggagtaccat
gtgatgagccagcactcagatttgcttccaaagggtcagcatcgcagcaggagatcagcc
aacgacgtgccagacataatagaggacattggtctgagcaacaaccgtggcaccaacatg
ctccacatcgcgctggaccgcagcagccagcagaggaccagcccagagagggagatcttc
accagaggagtccacccgcgtgagctcaaccagagagagagcggtgacgacggactagtg
ttgatcatcggcgtctttgtcgggctgctcctcacggtgctcgtcgtcatcgtggtggtg
ttactggtccggtctaagcgagagaagaaaggcgtacccgagagctccatcagcgcagag
cccatggtgacacaaacccttagtgacagctccgaggtctaa
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integrated database retrieval system
