Etheostoma cragini (Arkansas darter): 117941316
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Entry
117941316 CDS
T07493
Symbol
cdon
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117941316 (cdon)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_VEGFR-1-like_5th
C1-set
Ig_6
Fn3_VIN3
DUF7359
Motif
Other DBs
NCBI-GeneID:
117941316
NCBI-ProteinID:
XP_034722274
LinkDB
All DBs
Position
3:complement(4172553..4214324)
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AA seq
1121 aa
AA seq
DB search
MDSGLRVLLSTVLCLSQALLIGCSSQYPSFRSEPASVVQSPGSVARLRCLVSPPSASVSW
RFRGRPLDRDNQSGVELNQGLLTISSLKPSHVGVYQCVARLDHGPAIASRHARVAIAEIS
EYEDARRRSLSVQEGSSVLIECPLPHSVPPALPRLRARGERIEVSTDDYVVLPSGNLQIL
SVSARHQGMYKCGAFNPVTGETVMQPNGTKLSVKHSDSPPPVRIVYPTAPVTVSVQRSQP
LTLECVVSGSPAPAATWFKNGKEVTTGPSHQQQHNNLAFVSVMRSDEGSYTCAAESTQGT
VISANYTVNVLEPVSITEGLTNQLVSPGSSTRFTCTARGNPSPNITWLFNANPVTPSHRF
QISGSSLVIADVTPQDEGVFQCLLDNGIGSAQSYGILLSLTDVQLGSTAAVLPEASPSLH
PMQSDEGHERFLTEDDGDAVNLPVDRSSERPTPEAPIITSPPQTHKPDIYDLEWRAGRDG
GSPINAYFVKYRKVDEMGTVVGSWHTVRVPGSEKTLRLSELESSSLYEVLMVARSSAGEG
QPAMLTFRTGKEKSNTSNKNPSNPPVISMPPKAPEDKNANTHFGVVIHDRVPEAPDRPTI
SMATESSVYVTWIPRANGGSPITAFRVEYRRGRSAEWIVAADNISPLKLSVEVRNLEPGS
SNKFRVVAVNMYGESPHSIPSKPYQVPQASPRIADRPVVGPHISSTDAISDTQIMLRWTY
SPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGVKHWHMIGHLQPETSYDIKMQCFND
GGESEYSNVMICETKARQSPGSPSQHPITPPYPHPQEPPSPPGGLLYLIVGCVLGVMVLI
LLAFIAMCLWRNRQQNNMHKYDPPGYLYQPAEMNGHVLEYTTLSGTSRINGGVHGGYSHN
GPMLSQGCHHLHHKLPNGLALLNGSGSLFSPGHPHSHNGTLPHSTRDCEHPHPHHHHNGG
GMYTALPQTESSDCMSCQNLCNNNRCYNKTNGTFSSGTLPVMHRVAPCQQDGLEMVPLPS
SQCHGPDSHLLSGDPGADAGGRPDEHRESSPSQHSCCLVGNNDNCPADNTAEEELECVDT
EGPVVCWESLGLPDLDCDEKPGWISSSSLAGELIQPSPQEV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctcagggtcctcttgtccactgtgctgtgtctcagccaggccctgctc
atcggctgctcatctcagtatccctctttccgctctgagcctgcctccgtggtccagagt
ccaggctctgttgcccgtctgcgctgcttagtaagtcctccatcagcgtcggtttcctgg
cgcttcagaggccgtcccctggatcgggacaaccagtccggtgtggagctcaaccagggc
ctcctcaccatctcctcccttaagcccagccatgttggcgtctatcagtgcgtggcacgc
ttagaccacgggccggccatcgccagccgccacgcgcgcgtggccatagcagaaatctca
gaatatgaagatgcccgacggcggtcgttatcggtgcaggagggcagctctgttcttata
gagtgtcctctaccgcacagcgtccctccagctcttcctaggctgagagcacgaggggag
cggatagaagtgtcaacagatgactatgtagttcttccgtctggaaacctccagattctc
tctgtttcagcccggcaccagggcatgtataaatgtggtgcgttcaaccctgttactggg
gaaaccgtcatgcagcctaatggcactaagctgtcggtgaaacattcagactctcccccc
ccagtgcggatagtttaccccaccgccccagtgactgtttcagtgcagcggtcccagccg
ctgacgttggagtgtgttgtgtctggtagtcctgcaccagcagcgacatggtttaagaac
ggtaaggaggtcacaacggggccttctcaccaacaacagcacaacaacctggcctttgtt
tcggtgatgaggagcgatgaagggagttacacctgtgcggctgagagcacgcaagggact
gtgatcagcgcaaactataccgtcaatgttctcgagcctgtgtctatcactgagggcttg
accaaccagctggtctctcccggctcctccacccgttttacctgcacagcgagaggaaac
ccttccccaaacatcacctggctgttcaacgccaaccccgtcaccccatcacatcgcttt
cagatctctggctcctcgcttgtcattgcagatgtgactccacaggatgagggcgtgttc
cagtgtctgctggacaacgggatcggctcggcacagtcatatggaatccttctctccctg
acagatgtgcagctgggctccactgccgccgtgctgcccgaggcttcaccctcgctgcac
cccatgcagagcgacgagggccacgagcgcttcctgaccgaagacgacggcgacgccgtc
aacctgccggtcgacaggagcagtgagaggcccactccggaggcgccgatcatcaccagc
ccgccacagacccacaagcccgatatttacgacctggagtggagggccgggcgggatggc
gggagtccaatcaacgcctattttgtcaaataccgtaaggttgatgaaatgggaacagtg
gtggggagttggcatacagttcgtgtccctggcagcgagaagaccctgcggctgtcagag
ctggagtcctccagtctctacgaggtgctgatggtcgcccggagttcagccggcgagggc
cagcccgccatgctcaccttccgcaccggcaaggagaagagcaacacctccaacaagaat
ccgtccaaccctcccgtcatctccatgcctcccaaagctccagaagacaaaaacgccaac
acacactttggtgtggtcatacacgaccgagtgcctgaggcccccgaccgccccaccatc
tccatggcgactgaaagttcggtgtatgtcacctggatcccgagagccaacggcgggtcg
ccgatcacagctttccgtgtggagtacagacgcgggcgcagtgccgagtggattgtggct
gcggataatatctcaccgcttaaactgtccgtggaagtccgtaatctggagcctggttcc
tccaataagtttcgtgtcgtagccgtgaacatgtatggcgagagtcctcacagcattccc
tccaagccctatcaggtgccacaggccagcccgcgcatcgcagaccgtcccgtggtcggc
cctcacatctcatccaccgacgcaatcagcgacacacagatcatgctgcgctggacttat
agtccctcgagtaacaacaacaccccgatccaaggcttctacatttactaccggcccacg
gacagcgacaacgacagtgactacaaaagagacgtggtcgaaggtgtaaaacactggcac
atgattggacacctccagcctgagacctcctacgatatcaagatgcagtgcttcaacgac
ggaggagagagcgaatacagcaacgtcatgatctgcgagaccaaagcacgtcagtcccca
gggtcgcccagccagcaccccattaccccaccctacccccacccacaggagccacccagc
ccacctggaggactgctgtacctgattgtgggctgtgttttgggggtgatggtgctcatc
ctgctggcttttatcgccatgtgtctgtggaggaatcgccagcagaacaacatgcacaaa
tatgaccctcccgggtacctgtaccagccagcggagatgaatggccatgtcctggagtac
accaccctgtctggcaccagccgcatcaacgggggcgtccacgggggatacagccacaac
gggcccatgttatcccaagggtgccatcaccttcaccacaaactccccaacggcttggcg
ctgctcaacggctccggcagcctgttctcacccggccacccacacagccacaatggcacc
ctgccccacagcacgcgggactgcgagcacccgcacccccaccaccaccataacggcgga
ggcatgtacaccgctcttccccaaacagagtcgtctgactgtatgagctgtcagaacctc
tgcaacaacaacagatgttacaacaagaccaatggcactttctccagcggcactctgccc
gtaatgcatcgcgtggcgccgtgccagcaggacggtctggagatggtgcctctgccttcc
tcgcagtgccacggccccgacagccatctgctctctggggacccgggggccgacgcaggg
ggccggccagacgagcacagggagtcctcgccctcgcagcattcctgctgtctggtcggg
aacaatgacaactgtccagcagacaacactgctgaggaggagctggagtgtgtggacacg
gaggggcctgtggtgtgctgggagagtctcggcctgccagacttggactgtgacgaaaag
cccgggtggatctccagcagcagcctggcgggcgagctgatccagcccagcccacaggag
gtctga
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