Etheostoma cragini (Arkansas darter): 117941329
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Entry
117941329 CDS
T07493
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117941329 (trpc4b)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117941329 (trpc4b)
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_3
Ank
Ank_4
PKD_channel
YVC1_C
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
117941329
NCBI-ProteinID:
XP_034722280
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Position
3:4597397..4610344
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AA seq
860 aa
AA seq
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MSQLYYRKADNSSYRDRIPLRIVRAESELSALEKAYLGAVDKGDFASVKQALVEAEIYFR
ININCIDPLGRTALLIAIDNENLEIIDLLLSFNVYVGDALLHAIRKGVVGAVELLLNHKK
PRGEKQVPPILLDRQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSVPQPHAVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSRVENEFKSE
YEELSHMCKQFAKDLLDQTRSSKELEIILNYRDDMNPLLDETTNDLARLKLAIKFCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCIFIGLLFPLLSILYLISPKSRYGLFIR
KPFIKFICHTSSYLTFLFLLFLASQHIAAAHPEHQGPKPTTVEWMILPWVLGFIWTEIKQ
MWDSGFQDYLDDWWNLMDFIMNSLYLATISLKIVAFAKYSGHKPRDSWEMWHPTLVAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETEDVKCKGIRCEKQNNAFSTLFETLQSLFWSIFGLISLYVTNVEPGHEFTEFVGSTMF
GTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNIIP
SPKSVYYLFGWIKTLLFKRTSIIRLETFESLGRRAAENVRVNHVYQEVLRNLVKRYVAAM
IRDAKTEEGLTEDNFKELKQDISSFRYEVLGMMKGNPQGGNVASSTLAYPGNSFKYSPKF
PIDEPQQTLNVFDLTVPTLPITRSGSLQRHSRLPSQKCDEIYSLSEEDTVGSSGRNPNLL
HTEKVIVEVLQKVEKGLSGD
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattacagaaaagcggacaactcctcatacagggaccgcatccctctg
cggatcgtccgggccgaatctgagctctctgctctggagaaggcctacctgggggctgtg
gacaagggggactttgccagtgtgaaacaagccctggtggaggctgagatctacttccgg
atcaacatcaactgcatcgaccccctggggcgcacagcgttgctcattgccatagacaat
gagaacctggagatcattgacctgctgctcagctttaatgtatatgtgggggatgccctg
ctgcatgccatccggaaaggagtggtgggggccgtggagctgctgctcaaccacaagaag
ccccgtggggaaaaacaggtcccaccaattctactcgacagacagttttcagacttcacc
ccagacatcactcccatcatcctcgcagcccacaccaacaactatgagatcatcaaactg
ctagtgcagcgaggtgtttccgtacctcagccacatgctgtgcgctgcaactgcgtggag
tgtgtgtccagttccgacgtggacagcctacgccactcgcgctcccgccttaacatctac
aaggccctcgccagcccgtccctgattgctctctccagcgaggatcctttcctcacggcc
ttccagctcagctgggagctgaaggagctcagcagggtagagaacgagttcaagtccgag
tatgaggagctgtcccatatgtgtaaacaatttgcaaaggacctcttggaccagacccga
agctctaaggaattggaaataatactcaactaccgtgatgacatgaaccctctgctggat
gagaccactaatgatctggcccgactgaagctggctatcaaattttgccagaaagagttt
gttgctcaacccaattgtcagcagctgctggcgtctcggtggtatgatgagtttccaggc
tggaggaggcgtcactgggcaggaaaactcatcacatgtatcttcattggcctcctcttc
ccactgctatccatcttatacctgatctctccaaagagccgctatggcttattcatccgc
aagcccttcatcaagttcatctgtcacacttcttcctacctgaccttcctcttcctgctc
ttcttggcctcacagcacatagccgcggcacacccggaacatcaaggcccaaaacccacc
accgtggaatggatgatcctgccctgggtgcttggttttatatggactgagatcaagcag
atgtgggatagtggtttccaagactacctagatgactggtggaacttaatggacttcata
atgaactctttgtatcttgcaacaatttctctgaaaattgttgcctttgcaaagtacagt
gggcacaaacccagagacagctgggaaatgtggcacccgactttggttgcagaggcattg
tttgccatcgccaacatcttcagctccttgcgcctcatctgccttttcactgccaactcc
catctgggccccttacagatctcactgggccgcatgctcctggacatcctcaagtttctc
ttcatctactgtctggtgctcctagcctttgccaatggcctaaaccagctgtacttctat
tatgaaaccgaggatgttaagtgcaaggggattcgctgtgaaaagcaaaacaacgccttc
tcaacgctgttcgagacactacagtcattattttggtctatatttggcctgatttccctc
tatgtgaccaatgtggaaccgggacatgaatttactgagtttgtgggctctaccatgttt
ggcacgtacaatgtcatctccctggtagtgcttctgaacatgcttattgcaatgatgaac
aactcctaccagcacattgctgatcatgcagacatagaatggaaatttgcaagaacaaaa
ttatggatgagctattttgaagaagggggaactttgccatctccattcaatataatacca
agtccaaagtcagtttattatttatttggatggataaagacgctgttgtttaagagaaca
agcataataaggctcgaaaccttcgaaagtttggggagacgcgcagccgaaaatgtaaga
gtaaaccacgtgtatcaggaagttttgaggaaccttgttaagcgatatgtggccgcaatg
atcagagatgctaagacagaggaaggcctgacagaagacaatttcaaggagctaaagcaa
gatatctccagcttccgctatgaagtcctgggaatgatgaaggggaaccctcaaggtggt
aacgttgcaagctccaccttggcataccctggaaactcattcaaatattctcctaaattc
cctattgatgagcctcaacagacactaaacgtgtttgatttgaccgtcccaaccctgccc
atcaccaggtctggatccctccagagacacagcaggctcccttctcagaaatgtgatgaa
atatactcattgtcagaggaagatacggtgggatctagtggacgaaacccaaacctactt
catactgagaaagtaattgtggaagtcttacagaaagtggagaaaggactttcaggagat
tga
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