Etheostoma cragini (Arkansas darter): 117941649
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Entry
117941649 CDS
T07493
Symbol
tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117941649 (tsr1)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117941649 (tsr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
NUSAP
Motif
Other DBs
NCBI-GeneID:
117941649
NCBI-ProteinID:
XP_034722511
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All DBs
Position
3:3113751..3124500
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AA seq
834 aa
AA seq
DB search
MAANEEKQGHRPGIYKQKNKGHKHGKHRTKGEIERENKGRVSVTALTKKQRKEQKRMDRR
HKASQLRRNKKDMVLTEKRRLGSRDGPPHLVAVVSLHAGVDAGAVTKLLRGEGTGGVVHQ
ERCISGVIDSFGLLLPRFKQRFIFLSHSTADIHSLLDVAKIADSLVFVLDSTAGWDSYGD
YCLSGLFAQGLPSHALVCQGLSDIPVKKKVESRRALSKITEIRFPEARLFPLDSEQDATL
LLRHLGTQRQRKLGFRSRRSHLVAQQVTFTPNSPAEGTAGGPTGLGTLCVSGYVRGRPLQ
VDRLVHISGHGDFQLSQIDAPSDPLPLNLATARPTKPGKGDVDMLDGFEAEAPVRVLMKA
EPSCRESLQAEAEVDPMDGEQTWPTETELLEAEEARKTKRVMKVPKGTSDYQASWIVDED
EEVNGEIDEESSEEDDDDDDMLDEAMDGGDEDNMSQEPGSGCVSEEEEEEEDEEVEELCS
TERTGADLRYDEHIDEAAEVEGLKRYREARANEMFPDEVDTPLDIAARIRFQRYRGLKSF
RASPWDPMENLPLNYSRIFQFQSFERTRRRVLAEAAAEDEGAMVGWYVTLHIINVPFSVM
ESVQSGRPLMMVSLLPHEQKMSVMHLLVRRHPSNTEPIKSKEELVFHCGFRRFRASPIFS
QHTSADKHKMERFLRPDAPTVVSVYAPITFPPAGVLLFKQRNDGIQDLVATGSLLSCDPR
RVVLKRIVLSGHPFKINRRSAVVRYMFFNRDDIMWFKPVELRTKWGRRGHIKEALGTHGH
MKCVFDNQMRSQDTVLMNLYKRAYPRWTYDPYVPLSLPWVKREPTVEMDDLDME
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaatgaggaaaaacagggccacaggcccggcatatataaacagaaaaataaa
ggccacaaacatggcaagcaccggacgaaaggtgaaattgagagagaaaacaaagggaga
gtttcggtgacagcccttaccaaaaaacagaggaaagagcagaagaggatggacagaaga
cacaaagccagccagctacgcaggaataaaaaagacatggtcctgacagaaaagcgacgt
ctaggcagccgggatggtcctcctcatttggtcgctgtggtgtccctccatgctggagtc
gatgccggtgctgttaccaaactgctacgtggcgagggtactgggggtgtcgtgcatcag
gagcggtgcatcagtggtgtcattgacagttttgggctgcttctgcctcgttttaaacaa
aggttcatcttcctaagccacagcacggctgacatacactccctgctggatgtggcaaag
attgcagatagccttgtgtttgtgttggactcgactgcaggttgggacagctatggagac
tactgtctctctggcctctttgcccagggcctccccagccatgcgctggtgtgtcagggt
ttgtctgatattcctgtgaagaagaaggttgagtccaggagagctctgtcaaagatcaca
gagatccgtttccctgaagcccgtctcttccctcttgattcggagcaggatgccactctg
cttctccgacacttgggcacccagaggcagaggaagctcggtttccgctccagacgttcc
catcttgttgctcagcaagtcaccttcacgcccaacagccctgctgaggggacagccggc
ggccccactggcctgggcaccctctgtgtctctgggtacgtccgtggccgccctctacaa
gttgacagactggtgcacatcagtggacatggagactttcagctcagtcagatagatgct
ccatcagaccctctgcccctcaacttagcaacagccagaccaacaaagcctggcaaggga
gacgtcgatatgctggatggatttgaagctgaggctccagtgagggtgctcatgaaagca
gagccatcctgcagggagagtctgcaggcagaggcggaggtggaccccatggatggagag
cagacgtggccaacagaaaccgagcttctggaagctgaagaggccaggaagacaaaacgt
gtgatgaaggtccccaaaggaacatcagactaccaggcctcgtggattgttgatgaagac
gaggaggtgaacggagagatagacgaggaaagcagcgaagaagatgatgacgatgacgac
atgttggacgaggccatggatggaggagatgaggacaatatgtctcaggagccaggttca
ggctgtgtctcagaagaagaagaagaagaggaagatgaggaggttgaagagttgtgctcc
acagagcgaactggtgcagatctgcgctatgacgagcacattgatgaggctgcagaagtg
gaaggcctaaaacgctaccgtgaggctcgagccaatgaaatgtttcctgatgaggtggac
acacccctcgacatagcagctaggatcaggttccagcgctacagaggcctaaaaagtttc
cgcgcctcgccctgggaccccatggagaacttgcccctcaactactctcgcatcttccag
ttccagagctttgaacgcactcgccgccgcgtcctagcagaggctgcagctgaggatgaa
ggcgccatggtgggctggtatgttacgctgcacatcattaatgtgcctttttctgtgatg
gagagtgtccagtcaggcagacctctcatgatggtgtctctcctgccccatgaacagaag
atgtcagtgatgcacctcttggtgaggagacaccccagcaatacagagccaatcaaatct
aaagaggagctggtgttccactgtggatttcggcggttcagggcatctcctatcttctct
cagcacacttcagctgacaagcataagatggagcgcttcctcaggccagatgcccccacc
gtggtgtctgtgtacgctccgattaccttcccccctgcgggagtcctgctcttcaaacaa
aggaatgatggcatccaggacctggtggctacaggaagtctgctcagctgtgaccctcgg
cgtgttgtgctgaagaggattgtactgagcggacacccgttcaaaattaaccggcgctct
gcggttgtccgttacatgttctttaacagggatgatatcatgtggttcaagccagtggag
ctgcggacaaagtggggtcggagaggccacatcaaggaggctttagggacacatggccac
atgaagtgtgtatttgataatcagatgcgctcgcaagacaccgtcctgatgaatttgtac
aagagagcgtatccgcgctggacatatgacccctacgtgccgctgtctttaccctgggtc
aagagagagccaactgtggagatggacgacttggacatggaatag
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