Etheostoma cragini (Arkansas darter): 117941665 Help Entry 117941665         CDS       T07493                                  Symbol robo1 Name (RefSeq) roundabout homolog 1 isoform X1   KO K06753   roundabout, axon guidance receptor 1 Organism ecra  Etheostoma cragini (Arkansas darter) Pathway ecra04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:ecra00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     117941665 (robo1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ecra04515]     117941665 (robo1) Cell adhesion molecules [BR:ecra04515]  Immunoglobulin superfamily   ROBO family    117941665 (robo1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 Ig_2 ig fn3 V-set C2-set_2 Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Ig_5 Ig_C17orf99 Unc5_NetrinR_N Ig_PDGFR_d4 Ig_J_second Motif Other DBs NCBI-GeneID:  117941665 NCBI-ProteinID:  XP_034722539 LinkDB All DBs Position 3:complement(5828478..6085703) Genome browser AA seq 1691 aa AA seqDB search MMRGMWSPLLIMALLRLAQGQDVPVVPETGVAQDGASEGATPAPTTEHEDDNSLGYTGSR LRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSQRM LLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPADVI VAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDERITIRGGKLMITNARKSDAGKYVC VGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARGDPVPTVRWRKDDG DLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVGKAEASATLTVHVMSVPPAFVVRP RNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQSGDLTITD AERSDMGYYSCQAINTAGSVLTKALLEITDVVSDRPPPVIRQGPTNQSVAVDGTVVLNCV ATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIASTPSGEASWK AYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTRTSVALSWRPNLNAGATPTSYVIE AFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITEAVKTQDI PPTSQGVDHRQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSPEG LQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPFFNEFQGTDSDVKIGKTLEEAPSA PPREVTVAESGDNGTAIMVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTLSV LIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRMTGDEIQENPLSQQISDVVKQ PAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGEGV SSAGRPGLLNIGESATQPWLADTWPNSCANHNDCGINCCTAGNGNSDSNLATYSRPADCI ANYNNQMENKQTNLMVPESGLYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATT QLIQSSIMGHNVNPDRGTGGSGGGMGGGEMNEKHCWKPTSVQQQKQEMGSQLQYNIMEQN KLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGQKKGLRTPKLPKQ STMNWADLLPPPPANPPPSRSTEEYSLSLEESCEPDMQCPMPPSHMYLQPDELEEEEEME RGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDSHERRRHAVSPPPPPRPLS PSHTYGYITSPLTLDTDGMEEEEEEEEDILEEEEEEGDDTDAEVAKMHYHHTHPHTHPHH PQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGSF FTDADFAQAVAAAAEYSGLRVAKYPNTLGHEVGGASARKYQINPSGHSPGSPVSTDSNMS MAAVHRRPPKKQKQHPAGHPGNQRREAYNEDLPPPPVPPPAALKSPTHPSKVVPEGRGAI SPKAGEGRDKRGGTGGHRPREGLDPKTASTERKDAQERQKTAHGVKANKHEGSAANKARQ HAGSEDIPSYSRPQFPAVNGPRDLSSSSSVSSRGSGGRRRGDGGRRNQADTGLNATGAFR LGDEELEMAES NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atgatgcgtggcatgtggtcgcccctcctcataatggctctgctcaggctggcccagggc caagacgttcctgtagtcccagagacgggagtcgctcaggatggggccagtgaaggggca acaccagctcccaccaccgaacacgaggatgacaactctttgggctacacaggatcccgt ctgcgccaagaggacaccccaccccggattgtggagcacccctctgacctgattgtctcc aaaggggagcccgccactctcaactgtaaagcggaggggcggccaaccccgacagtggag tggtacaaggatggagagcgggtggaaacggacagggacaatccccgttctcagcgcatg ctgctgcccagcggctccctcttctttctacgcattgtccatggacgacggagcaagccg gatgaaggttcctacgtctgcgtggcccgcaactacctgggagaagcagtaagccacaac gcctcgctggaagtagccattctacgtgatgacttcagacaaaaccctgccgatgtgatc gtggcggccggagagccggcggtcctagagtgtcaacctccacgcggacatcctgaaccc accatatcgtggaagaaagatggaataaacattgacgatcgagatgagagaatcactata cgcggggggaagctgatgatcacaaatgcccggaagagcgatgctgggaagtacgtgtgc gtcggcaccaacatggtcggagaacgtgaaagtgaaatagctgaacttacagtgcttgag cgtcccagctttgtgcgtcgcccaggcagccaagtggtgttagtggaccaaagtgtagag ttcaggtgtgaggcccgtggcgacccagttcccaccgtgcgctggaggaaagatgatggc gacctgcccaaaggaagatatgagattcgtgaggaccacaccctgaagatccgtcgcctg acctcggctgatgtaggctcctacacctgtgtggtagagaacatggtgggcaaggcggag gcatcggccacgctcaccgtccacgtcatgtctgtgcccccggcatttgtggttagacca aggaaccaggtggtgggggttggcagaactgtcaccttccagtgcgaggccactggaaac ccacagccagccattttctggcagcgggaagggagtcagaacctgctcttctcctaccaa cctcctcaaccctccagccgattttctgtatctcagtctggggacctgaccatcactgat gctgaacgctcagacatgggctactacagctgccaggccatcaacactgctggaagtgtc ctcaccaaggctctgctagagatcacagatgtcgtgtcagaccgcccgccaccagttatt cgacagggcccaaccaatcagtcggtagctgtagatggcaccgtggtccttaactgtgtg gcaacagggaaccccacccccaccatcctgtggaggaaggatggtgtcttggtgtccact catgactccagggtcaaacagctggacaccggcgcgttgcagatacgctatgcaaagctt ggtgacactggaacctacacctgcatcgcctccacacccagtggagaggcctcatggaaa gcttacttagaggtccacgaatttggagtcccagtccagcccaacagaccgactgaccca aacctgatccccagtgccccttccaaacctgaggtcactgacgtgacccgcacctctgtc gccctttcctggagacctaaccttaatgccggagccacacccacctcttatgtcatagag gccttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtgaaaactgag tcatttgtactgaagggcttgaagcccagtgcagtctacctcttcttagtacgggcagct aatgcctatgggctgagtgatcccagtcccattactgaagctgtgaaaacacaagatatc cctcccaccagtcagggtgtggaccatcgtcagatccaaagggagttgggagatgtggtt atccacctgcacaaccccaccattctctcctcctcctctgtcagggtgcagtggacagtg gagcagcagtcccagtacatccagggctacaaggtgatgtataggccttcaccggagggg ctgcagaggagtgaatgggcagtgttcgaggtgcgcacccctggggaagacagcgctgtt gtgccacagctccgtaagggagtcacatatgaattcaaagtccgccctttcttcaatgaa ttccagggaacagacagcgatgtcaaaattggcaagacgctggaggaagctcccagtgcc cctcctcgcgaggttacagtggcggagagcggggacaatgggaccgccatcatggtctcc tggcaaccccctccagaagaggagcagaatggggtggtccaggagtacaagatttggtgc ttggggaatgagagcaggtatcacatcaaccgtacagttgacggctcaaccttatccgtg ctgattcccagtcttgccccagggatccgctacagcgtggaggtagcagccagcaccggg gcgggtcccggggtcaagagcgatatcaccttcttccagcttgacgcgtctgggcgaatg acaggggacgagatccaggagaaccccctgtcccagcagatctccgatgtggtcaagcag ccggcttttatagcaggcataggagccgcgtgctggatcatcctcatggtcttcagcatc tggctgtaccgacaccgaaagaagaggaatggcctctccagcagctatgcaggcatacgc aaagtgccatcttttactttcacaccaacagtggcatatcagagaggaggggaaggtgta agcagcgctggaaggcctggtttgctaaacatcggggaatctgccactcagccctggctg gcagacacgtggccaaactcctgcgccaaccacaatgactgcggcatcaactgctgcact gcaggcaatggcaacagcgacagcaacttggcaacatacagccgccccgccgactgcatc gccaattataacaaccagatggaaaacaagcagaccaacctcatggtgccagagtcaggg ctctatggagatgtagacttgtccaacaagatcaatgagatgaagaccttcaacagtcca aacctgaaagatggccgctttgtgggtccagggggccagccgacaccgtacgccacaacc cagctcatccagtcctccatcatgggacacaacgttaaccctgacagaggaaccggaggg agtggaggaggaatgggtggaggggagatgaatgaaaaacactgctggaagccaacctca gtccagcagcagaaacaggagatgggctcccagctgcagtacaacatcatggagcaaaac aagctgaacaaggaccgctacagaggaggtgacagccctatgccagccaccatcccctac aaccagacccacgatagccacactggaggctcctacaacagctccgaccgaggcagcagc agtacctccgggagtcagggtcagaagaagggattgcgcacccccaaactacccaaacag agcacaatgaattgggctgaccttctgccccctccccctgcaaacccacccccaagtcgg agcacagaggagtactctctatcattggaagaaagctgtgaaccagacatgcagtgcccc atgcccccttctcacatgtacctgcagcctgatgagctggaggaggaagaggagatggag agggggcccactccccccatccgaggagcagcctcttcccctgcagctgtatcttatagt caccagtccacagccaccctcaccccctcaccgcaggaggagatgcagccgatgctccag gacagccatgaacgcaggcgccacgctgtgagccccccaccccctccaaggcccctctct ccttcacacacatatgggtacatcaccagcccgttgaccttggacactgatggtatggag gaggaggaggaggaggaggaggatatattggaggaagaggaggaggagggtgacgacaca gatgcagaggtggccaagatgcactaccaccacacccacccccacacacacccccaccat ccccagatgcatccacgaaggttgctgctacgagggcttgaacagacgcctgcgtccagc atgggcgacctggagagctcggttaccggctccatgatcaacggatggggctcggcttct gaagaggataatgtctcttcagggaggtccagtgccgtcagttcatcagatggatccttc ttcactgatgctgactttgctcaagcggttgccgcagccgcagagtactcaggcctgagg gtggccaaatatcccaacacactgggtcacgaagtgggaggagcttcagcgcgaaaatac caaataaacccatcaggacacagtcctggcagcccagtgtctacagacagtaacatgagt atggcagctgtacacaggaggcctcccaagaagcagaaacagcatcccgcaggtcaccca gggaaccagcgacgtgaagcctataatgaagatctcccacctcctcctgtcccacccccg gctgcgctcaagtcgcctacgcacccctccaaggtggtcccggagggccggggagcgatt tcccctaaagcgggtgagggtcgagacaaaagaggaggaacggggggccatcggcccaga gaaggcttagaccccaaaaccgcctcgaccgaacgaaaagatgcccaggagagacagaag acagcccatggggtgaaagcgaataaacacgagggtagcgccgccaacaaagcacgccaa cacgcaggttcagaggacattccatcctacagccgaccacagttccctgcggtcaacggc ccccgcgacctaagctcctccagctctgtgtcttccaggggctcaggggggcggcggaga ggagatggaggccgcagaaaccaggcagacaccggcctcaacgccacaggggccttccga ctgggagacgaagaactagagatggcagaaagctga

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