KEGG   Etheostoma cragini (Arkansas darter): 117941911
Entry
117941911         CDS       T07493                                 
Name
(RefSeq) coatomer subunit beta'-like
  KO
K17302  coatomer subunit beta'
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecra04131]
    117941911
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecra04147]
    117941911
Membrane trafficking [BR:ecra04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117941911
Exosome [BR:ecra04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117941911
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_LRRK2 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IP5PC_F HEAT_GCN1
Other DBs
NCBI-GeneID: 117941911
NCBI-ProteinID: XP_034723026
LinkDB
Position
3:complement(22846208..22859981)
AA seq 1219 aa
MPLRLDIKRKLTARSDRVKSADLHPTEPWMVASLYSGTVVVWNHETQMMVKTFELCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERVHMFEAHSDYIRCIVVHPTQPYILTSSDD
MLIKLWDWDRKWSCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSKTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVSFHPE
LPIILTGSEDGTVRVWHSNTYRLENTLNYSMERVWCICGQPGSNSVALGYDEGSIIIKLG
REEPAMSMDSSGKIIWAHHSEVQQANLKSMGETMGEARDGERLPLGVKDMGSCEIFPQTI
QHSPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYAIREGSNMVRIFKNF
KEKKAFKPDLGTEGIFGGFLLGVRSNSGLAFYDWESGELIRRIEIQPKHIFWSDSGELVC
IGTDESFFVLRYLPEKVAAAQESKEEITEDGIEGAFEVLGEVPEIVKTGVWVGDCFIYTS
SLNRLNYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNVISYFLLLSVLEYQTAV
MRRDFSTADKVLPTIPKEQRARVAHFLEKQGFRQQALAVTTDPEHKFELALQLGELEIAH
QLASEAESEQKWKQLAELATTKCQFSLAQECLHQAQDYGGLLLLATASGNANMVGKLADG
ADKDGKTNVAFLTYFMQGRLDKCLELLIETDRLPEAAFLARTYLPSHVSRVVKLWKDSLS
KVNQKAADALADPSQYSNLFPGLQQALLAEEYLKETHVPVRPAAEYPLIMPNEDRNVLKE
SAAFVPKGEIAKSEEGLKSINDIVTVAAVMKATSAETPVLEEPIPVKKGNINPVPATEKE
SIPTAASSLPRTVTEERAEAKQNKLVSFEVETIAKSEEALVSVKEDILEFTTDFGAVEPE
MVQSTPVEAVRSSAETDVQDVSPAADAVPAACLSETYLIETKFESIMATEKTSSETVATR
DITEDVQVSTVLIGDTDVRESIANEEMPVYELEEGIIPSAPTNIDTAAEGTLLTTELVAE
TAAPPVEVEELISFETTASPVLDLPVPAQTFPDLALDPLLDPLEEAVPAQEPEQEEQTKA
LPVKSEDNLDLAVPPQAEPEVLSPLVAPVAEDEADPEGAEEPAEDLEAEMNEILDDLDLD
NFDLEDIDTTDINLDEDFE
NT seq 3660 nt   +upstreamnt  +downstreamnt
atgcctctgcggttggacatcaagcgaaagctgaccgctcggtctgatcgggtgaagagt
gcagatctgcaccccactgagccctggatggtggctagcctctacagcggcactgtggtg
gtctggaaccatgagacacagatgatggtgaaaacctttgaactgtgtgaccttcctgtc
cgagtagccaagttcgtagccaggaaacactgggtcattgctggtgctgatgatatgcag
atccgggtgtttaattacaacactctggagcgagttcacatgtttgaggctcactctgac
tacatccgctgtatcgttgtccaccctacacagccctacatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggacagaaaatggtcatgtggtcaagtgtttgaggga
cacactcactacgtcatgcagattgtcattaaccccaaagacaacaaccagttcgccagc
gcctcactggaccgaactattaaggtgtggcagctgggatccaagactcccaacttcact
ctggagggccatgagaagggggtgaactgcattgattactacagcggaggagacaagccc
tacctcatttcaggggctgatgaccgcctggtcaagatctgggattatcagaacaaaacc
tgtgttcagactctggagggtcacgcccagaatgtgacctgtgtcagtttccatcctgag
ctgccaatcatcctcacaggttctgaggatggcactgtgcgagtgtggcactccaacacc
taccggctggaaaacactctcaactatagcatggagagggtgtggtgtatatgtggccag
cctggctccaacagcgtggctctgggttatgatgaaggtagcatcatcatcaagctgggt
cgggaggagccagccatgtccatggactccagtgggaagatcatatgggctcaccactct
gaagtgcagcaggccaacctaaagtccatgggggagaccatgggtgaggctagggatgga
gagaggctgcccctgggtgtcaaagacatgggtagctgtgagatcttcccccagaccatc
caacacagccctaatgggagatttgtggtggtgtgtggagatggggagtatatcatctac
actgccatggccctgaggaacaagagctttggctcagctcaagagtttgtctgggcccat
gattcttcacagtatgccataagggaaggcagcaatatggtccgaatatttaagaacttc
aaagagaaaaaggcttttaaacctgacttaggaactgaagggatctttggtggcttccta
ctgggcgtgaggtcaaacagtggcttggctttctacgactgggagagtggtgaactgatc
cgccgaatcgagatccaacccaaacatatcttctggtccgactctggggagcttgtgtgt
atcggaacggatgagtctttctttgtgctgcgctacctaccagagaaagtggcagcggcc
caggagtccaaggaagagataacagaagatgggatagaaggcgcctttgaggtgctgggg
gaagttccagagatagtgaagactggggtttgggttggagactgcttcatctacaccagc
tctctcaacagactaaactactatgttggaggagagataatcaccattgctcacctggac
aggaccatgtatctgctgggctacatccccaaggacgatcgtctctacctcggagacaag
gagctgaatgtcattagctacttcctgctgctgtctgtgctggagtaccagacagctgtc
atgaggagggacttcagcacggccgacaaggttctacccacaatccccaaggagcagagg
gccagggtagcccactttttggagaaacagggcttcagacagcaagccctggctgtgacc
actgacccagaacacaagtttgaacttgccctgcaactgggagaactcgagatagcccac
caactggcctcagaggcagagtcagagcagaaatggaagcagctggcagagctcgctact
acaaagtgccagtttagcttggctcaggagtgtctgcaccaagctcaggattatggggga
ttattgctgttggccaccgcctcgggcaacgccaacatggtgggaaaattggcagatggg
gcagacaaggatgggaagaccaacgtggcctttctcacctacttcatgcagggaagattg
gacaaatgtctggaacttctcatcgaaacagatcggttgccagaggcagcatttctggca
agaacatatctgcccagccatgtgtcaagggtggtgaagctgtggaaggacagcctgtcc
aaggttaaccagaaggcagcagatgctctggctgacccctcccagtatagcaacctgttt
cctggcctccagcaagccctgctggctgaagagtacctgaaggagactcatgtcccggtc
aggcctgctgcagagtacccactcatcatgccgaatgaggatcgcaatgtcctaaaggaa
tctgcagcttttgtgcccaaaggagagatcgctaagtcagaggaagggttgaagagcata
aatgatattgtcacagtagcagcagtgatgaaggctacgtctgctgaaaccccagtattg
gaggaacccattccagtaaaaaaggggaatattaatcctgtcccagcaactgaaaaagaa
tccatcccaaccgcagcatcctctctgcctcgcacggtaacagaagagcgtgctgaagca
aagcaaaataaattggtgtcttttgaggtggaaaccattgcaaaatcagaagaggcttta
gtctctgtaaaggaagacattttggagttcaccaccgattttggtgccgtagagccagag
atggttcaatccactcccgtggaagctgtcagatcatcagccgagactgacgtccaggac
gtttccccagcagctgatgctgtgcctgctgcttgtctatctgaaacatatctaatcgag
acaaaattcgaaagcatcatggcaacagaaaaaacatcaagtgagacagtggcaacaaga
gatataacagaggatgtccaagtgagcactgttctgataggtgatacagatgtaagagaa
tctatagcaaatgaagaaatgcctgtgtatgaactggaagaaggtatcatcccctcagca
ccaaccaacatagatacagcagcagaagggactctccttactacggaacttgttgcagaa
acagcagcaccacctgtagaagtagaggagctcatctcctttgaaaccacagccagtcca
gtgctggatctgcctgttccagcccaaacatttccagatttggcccttgatccactacta
gatcctctcgaagaggcagtcccagcacaagaaccagaacaagaggaacaaaccaaagca
ctcccagtaaagtctgaggacaacctggaccttgctgtgcctccgcaggctgagccagag
gttttatccccacttgtagctcctgtagcagaggacgaggcagatcctgagggagctgag
gaacctgcagaagacctcgaggcagagatgaatgagatcctggatgatctggatctagac
aattttgacctagaggatatcgacaccacagatatcaacctggatgaagattttgagtga

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