Etheostoma cragini (Arkansas darter): 117941948
Help
Entry
117941948 CDS
T07493
Symbol
nectin3a
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
ecra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117941948 (nectin3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117941948 (nectin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117941948 (nectin3a)
04090 CD molecules [BR:
ecra04090
]
117941948 (nectin3a)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Nectin family
117941948 (nectin3a)
CD molecules [BR:
ecra04090
]
Proteins
117941948 (nectin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
C1-set
Keratin_assoc
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117941948
NCBI-ProteinID:
XP_034723092
LinkDB
All DBs
Position
3:complement(6286378..6319868)
Genome browser
AA seq
552 aa
AA seq
DB search
MEKRSPLKRTFPSNGLRLLASLLTFYGLSSGVSSNQVLVPEKVNAVLGKNITLSCRIEVG
SNLTQSSWERRLPSGTITLAVFNPEFGTSISAEYTKRISFVSPSVRDASITIEGAGFADV
GSYTCKVVTFPLGNTQASTYVNVLVEPKVYVSAGPTALLDGGNESLVATCIAERGRPAAE
VFWETELYGRSEKQSQDEANGTTSVHVRYLWPPQSYAQGKTLTCVVRHPALQTEFRIPFM
LNVQFAPVVSIIGGDKNWYVGQENVKFTCGAKANPPAREFTWTRLDRLMPEGVEKSNNSF
AFTRPLERNDSGVYRCLVVNDIGFHSQDVTLYVQDPPPTTAAPSTTASLLRDTSGSGTAV
DERKALFTSPTLASLPDGSLGTIVGGAVGGVLFLILLLILGGACFMRQRRTFRGDYYTKQ
YLGPSDMQKESQLDVLQPHELQEVYGDKTSKGSQELKPKLGGDIIYPDYIPDHKDRDDWA
DKGGVHRGLKEGNYYPDHYNTQNIHPCGPPVHSTIVANGSPYLPEDCYDNGTDSDYVSHM
DGSVISRREWYV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagatcaccgctcaagaggacttttccatctaacggactgcgactgttagca
tcacttctcaccttttacggactttcctcaggtgtgagcagtaaccaggtgctggtcccc
gagaaagtgaatgcagtgctggggaagaacatcacactgagctgcagaatagaggtgggc
tccaacctcacacagagctcctgggaacgtcgtctcccttcaggcaccattaccttggca
gtgttcaaccccgagtttggaacctccatctctgcagaatacaccaagcgcatctcgttt
gtttccccctcggtacgagatgcttccattaccattgaaggagctggctttgcagatgtc
gggtcctacacctgcaaagtggtaacatttcctctgggcaatacacaagcatcaacctac
gttaatgtattagtggagccaaaggtgtatgtgtctgctggccccacagctctgctcgat
ggcgggaacgagtcgctggtggccacctgcatagccgagcgtggccgtcccgccgctgag
gtattctgggagacggagctttacggacgaagtgagaaacaaagtcaggatgaggccaac
ggcaccaccagcgtacacgtgcgctacctgtggccaccgcagagctacgcacaggggaag
accctcacctgtgtggtgcgccacccggccctgcagacagagttccgcatacccttcatg
ctaaatgttcagtttgctccagtggtatcgataataggaggtgacaaaaattggtatgtg
ggtcaagagaatgtgaagttcacctgtggagccaaggccaacccacctgcccgtgaattc
acatggaccaggttggacagattgatgcccgagggtgttgagaagtcaaacaatagcttt
gctttcactcgcccgttggagcgcaatgactctggcgtgtaccgctgtctagtggtaaac
gacatcggtttccacagtcaagatgtaaccctctacgttcaagatcctccccccaccacg
gccgcccccagcaccactgcatcgctcctccgcgacacctctggatccggcaccgctgtg
gacgagcggaaagccctgtttacctccccgaccctggcatccctccccgacggcagcctg
ggcactatcgtcggtggggccgtaggcggcgttttattcctgattctcttactgatcctc
ggcggggcttgcttcatgcgacagcgcaggaccttccgaggagactactacaccaaacag
tacctgggaccctctgacatgcagaaggagtcccagctggacgtgctgcagccgcacgag
ctgcaggaggtctacggagacaagacgagcaaaggcagccaggagctgaaacccaaactg
ggcggagacatcatctaccccgactacatccccgaccacaaggatagggacgactgggcc
gacaaggggggggtccacaggggcctcaaggagggaaactactacccagatcactacaac
acccagaacatacacccctgtgggcctcctgtgcacagcaccatagtggccaacggctcc
ccctacctcccggaggactgctatgacaatggtacagacagcgactacgtgtcccacatg
gacggatctgtgatctcacgcagggagtggtatgtttga
DBGET
integrated database retrieval system
