Etheostoma cragini (Arkansas darter): 117941995
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Entry
117941995 CDS
T07493
Symbol
stx1a
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117941995 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117941995 (stx1a)
Membrane trafficking [BR:
ecra04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117941995 (stx1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
PspA_IM30
Spectrin_Anc-1
Dna2
Lzipper-MIP1
FAN1_TPR
WXG100
Ferritin
FUSC
Hydro_N_hd
FapA
Motif
Other DBs
NCBI-GeneID:
117941995
NCBI-ProteinID:
XP_034723165
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Position
3:complement(11263961..11322003)
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AA seq
287 aa
AA seq
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MKDRMQELKHGKETTEEEDEVAVGMDKGFMDEFFEQVEEIRGFIESLAEKVEEVKRKHSA
ILASPNPDEKTKAELEDLMADIKKFANKIRSKLKSIQQTIEQEESQNKASADLRIRKTQH
STLSRKFVEVMSEYNTTQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDNITEQAMNEIETRHNEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKVILIGGCIAACLTVLIICLAVGLS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcatgcaagaacttaaacatgggaaggagacgacagaggaggaggatgaa
gtcgctgtggggatggacaaaggctttatggatgaattctttgaacaggtggaggagatc
cggggttttatcgaatctctggcagagaaggttgaggaggtgaagaggaagcacagcgcc
atcctcgcttcacctaacccagatgagaaaactaaggccgagctggaggatctcatggca
gacatcaagaagtttgccaacaaaatacgctccaaattaaagagtattcagcaaaccatt
gaacaagaagaaagccagaacaaggcatcagctgacctgaggatacgcaagacacagcac
tccacactgtcccgtaagtttgtcgaggtgatgtcagaatacaacaccacccagtcagac
tacagggagcgctgcaagggacgcattcagagacagctggagatcactgggagaaacaca
acaaatgaggagctggagagcatgttggagagtgacaaccctgctatctttacctcgggg
atcattatggacaacatcaccgagcaagctatgaatgagattgagacacggcacaatgaa
atcatcaagctggaaaacagcatcagagagcttcacgacatgttcatggacatggccatg
ctggtggagagccagggggaaatgatagaccgcatagagtacaatgtggagcactcagta
gactatgtggagagggcagtatcagacactaagaaggcggttaaataccagagtaaagcc
cggaggaaggtgatcctgataggaggttgtattgcagcatgtctgaccgtcctcattatt
tgcctcgcagttggactcagttag
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